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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
1998-5-14
pubmed:abstractText
Circadian (approximately 24-hr) rhythms in Drosophila melanogaster depend upon cyclic expression of the period (per) and timeless (tim) genes, which encode interacting components of the endogenous clock. The per gene has been isolated from other insects and, more recently, a per ortholog was found in mammals where its expression oscillates in a circadian fashion. We report here the complete sequence of a tim gene from another species, Drosophila virilis. TIM is better conserved than the PER protein is between these two species (76 vs. 54% overall amino acid identity), and putative functional domains, such as the PER interaction domains and the nuclear localization signal, are highly conserved. The acidic domain and the cytoplasmic localization domain, however, are within the least conserved regions. In addition, the initiating methionine in the D. virilis gene lies downstream of the proposed translation start for the original D. melanogaster tim cDNA and corresponds to the one used by D. simulans and D. yakuba. Among the most conserved parts of TIM is a region of unknown function near the N terminus. We show here that deletion of a 32 amino acid segment within this region affects rescue of rhythms in arrhythmic tim01 flies. Flies carrying a full-length tim transgene displayed rhythms with approximately 24-hr periods, indicating that a fully functional clock can be restored in tim01 flies through expression of a tim transgene. Deletion of the segment mentioned above resulted in very long activity rhythms with periods ranging from 30.5 to 48 hr.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-1524831, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-1702156, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-2105471, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-2835286, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-3102970, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-3106823, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-3152288, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-3208754, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-3413487, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-499572, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-6799211, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-7481771, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-7481772, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-7481773, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-7600569, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-7610493, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-7619519, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-7855595, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-7855598, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-7946353, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-7973706, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8062834, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8128244, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8128246, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8128247, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8171325, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8194516, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8391649, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8485519, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8596937, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8596938, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8600384, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8602533, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8625406, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8726101, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8864121, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8938123, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8938124, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-8946254, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-9016581, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-9160755, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-9160756, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-9323128, http://linkedlifedata.com/resource/pubmed/commentcorrection/9504927-9333243
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Feb
pubmed:issn
0016-6731
pubmed:author
pubmed:issnType
Print
pubmed:volume
148
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
815-25
pubmed:dateRevised
2009-11-19
pubmed:meshHeading
pubmed:year
1998
pubmed:articleTitle
Conserved regions of the timeless (tim) clock gene in Drosophila analyzed through phylogenetic and functional studies.
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