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SPARQL Query
Append predefined namespaces:
bbc-pont
,
biopax-2
,
calbc
,
calbc-group
,
chebi
,
cpath
,
dailymed
,
dailymed-drugs
,
dailymed-ingredient
,
dailymed-instance
,
dbp-ont
,
dbp-prop
,
dbpedia
,
dbtune
,
dc
,
dc-term
,
diseaseontology
,
diseasome
,
diseasome-diseases
,
diseasome-gene
,
diseasome-instance
,
drug-category
,
drug-target
,
drugbank
,
drugbank-class
,
drugbank-drug
,
drugtype
,
entrez-gene
,
entrez-goterm
,
entrezgene
,
factbook
,
fb
,
ff
,
foaf
,
freebase
,
gene-rif
,
geneontology
,
geo-ont
,
geo-pos
,
geonames
,
gr
,
hapmap
,
lhgdn
,
lifeskim
,
lingvoj
,
linkedct
,
linkedct-condition
,
linkedct-intervention
,
lld
,
music-ont
,
nytimes
,
oasis
,
om
,
ontotext
,
opencyc
,
opencyc-en
,
ot
,
owl
,
owlim
,
pext
,
phenotype
,
pkm
,
psys
,
ptop
,
pubmed
,
pubmed-article
,
pubmed-author
,
pubmed-mesh
,
pubmed-meshheading
,
pubmed-qualifier
,
rdf
,
rdfs
,
relontology
,
sider
,
sider-drugs
,
skos
,
skos-xl
,
snp
,
sw-vocab
,
symptom
,
ub
,
umbel
,
umbel-ac
,
umbel-en
,
umbel-sc
,
umls
,
umls-concept
,
umls-label
,
umls-semnetwork
,
uniprot
,
uniprot-protein
,
uniprot-unstable
,
wordn-sc
,
wordnet
,
wordnet16
,
xsd
,
yago
Query:
Include inferred
Submit
Sample queries:
SPARQL Select template
,
Select Genes and their links to GeneOntology terms
,
Select interacting partners for specified protein
,
Select interactions where participates specified protein
,
Select all proteins that are linked to a curated interaction from the literature and to inflammatory response
,
Select all proteins that are linked to a curated molecular interaction, to inflammatory response and to a target of existing drug
,
Select drugs related to asthma that are linked to a molecular interaction
,
Select drugs related to asthma that are linked to a curated molecular interaction in the literature where the protein is known to cause inflammatory response
,
Select all located in Y-chromosome human genes (query 1)
,
Select all located in Y-chromosome human genes with known molecular interactions (query 2)
,
Select all located in Y-chromosome, human genes with known molecular interactions, which are analysed with 'Transfection' (query 3)
,
Documents, which describe relation between white blood cells, respiration disorders and tobacco smoke
,
What are the exclusion criteria for studies that use as intervention drug treating respiratory diseases?
,
Is there provenance for causal relations between COX-1, COX2, eicosanoids and non-steroidal anti-inflammatory drugs (NSAIDs)?
,
Count all interactions from BioPax datasets (SPARQL 1.1)
,
Select grouped number of interactions for specified protein (SPARQL 1.1)
,
Select UMLS concepts and their literals with lowest sorting order (SPARQL 1.1)