Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
12
pubmed:dateCreated
1997-3-28
pubmed:abstractText
In the present study, the suitability of RNA amplification by nucleic acid sequence-based amplification (NASBA) for the detection of Chlamydia trachomatis infection was investigated. When comparing different primer sets for their sensitivities in NASBA, use of both the plasmid and omp1 targets resulted in a detection limit of 1 inclusion-forming unit (IFU), while the 16S rRNA appeared to be the most sensitive RNA target for amplification (10(-3) IFU). In contrast, for DNA amplification by PCR, the plasmid target was optimal (10(-2) IFU), which is 10 times less sensitive than rRNA NASBA. To exclude false negativity in NASBA detection because of inhibition of amplification and/or inefficient sample preparation, an internal standard was developed. The internal control was added prior to sample preparation. This 16S rRNA NASBA with an internal control was compared with a plasmid DNA PCR by using a group of C. trachomatis-negative (n = 41) and -positive (n = 37) cervical scrapings, as determined by enzyme immunoassay (EIA). In addition, urine samples from the EIA-positive women were tested (n = 17). Both NASBA and PCR assays were able to detect C. trachomatis in all EIA-positive cervical scrapings, the corresponding urine samples, and two samples from the EIA-negative group. The internal NASBA standard was found clearly in all EIA-negative samples. In conclusion, these results indicate that detection of C. trachomatis by RNA amplification by NASBA with an internal standard is a suitable and highly sensitive detection method, with potential use in the diagnosis of urogenital C. trachomatis infections with cervical scrapings as well as urine specimens.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-1280642, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-1331308, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-1335481, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-1500521, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-1583100, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-1642851, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-1691208, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-1726172, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-1997528, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-2071132, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-2289300, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-2308948, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-2362949, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-2460495, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-2678327, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-2982104, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-2999980, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-3073311, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7490313, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7529012, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7559945, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7588833, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7688753, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7747955, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7751371, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7790456, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7814494, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7822457, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7852556, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-7877640, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-8051221, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-8051267, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-8099080, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-8161439, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-8254312, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-8366168, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-8380182, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-8471317, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-8501220, http://linkedlifedata.com/resource/pubmed/commentcorrection/8940456-8510135
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Dec
pubmed:issn
0095-1137
pubmed:author
pubmed:issnType
Print
pubmed:volume
34
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
3108-14
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:8940456-Humans, pubmed-meshheading:8940456-Evaluation Studies as Topic, pubmed-meshheading:8940456-Cervix Uteri, pubmed-meshheading:8940456-Urine, pubmed-meshheading:8940456-Bacteriological Techniques, pubmed-meshheading:8940456-Female, pubmed-meshheading:8940456-Base Sequence, pubmed-meshheading:8940456-Genes, Bacterial, pubmed-meshheading:8940456-RNA, Bacterial, pubmed-meshheading:8940456-Uterine Cervical Diseases, pubmed-meshheading:8940456-Sensitivity and Specificity, pubmed-meshheading:8940456-Reference Standards, pubmed-meshheading:8940456-Chlamydia trachomatis, pubmed-meshheading:8940456-Chlamydia Infections, pubmed-meshheading:8940456-Plasmids, pubmed-meshheading:8940456-RNA, Ribosomal, 16S, pubmed-meshheading:8940456-Bacterial Outer Membrane Proteins, pubmed-meshheading:8940456-Nucleic Acid Amplification Techniques, pubmed-meshheading:8940456-DNA Primers
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