Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
1
pubmed:dateCreated
1999-2-11
pubmed:abstractText
The diagnosis of T-cell lymphoproliferative disorders, which frequently involve the skin and other extranodal sites, is often problematic because of the difficulty in establishing clonality in paraffin-embedded tissue. To this end, we developed a simple, nonradioactive method to detect T-cell receptor gamma (TCR-gamma) gene rearrangements by polymerase chain reaction single-strand conformational polymorphism (PCR-SSCP) in paraffin-embedded tissue. Jurkat and HSB-2 cell lines and peripheral blood samples from normal individuals were used as monoclonal and polyclonal controls, respectively. DNA was extracted from 24 biopsies of T-cell lymphomas, 12 biopsies of reactive lymphoid infiltrates, and 2 biopsies of primary cutaneous large B-cell lymphomas. Vgamma1-8, Vgamma9, Vgamma10, Vgamma11, and Jgamma1/Jgamma2 consensus primers were used for TCR-gamma gene rearrangement amplification and PCR products were analyzed by nonradioactive SSCP. Monoclonal controls yielded a well-defined banded pattern, whereas all polyclonal T-cell controls showed a reproducible pattern of smears. We detected monoclonality in 20/21 (95%) T-cell lymphoma cases, whereas no dominant T-cell clones were found in any of the reactive lymphoid infiltrates or B-cell lymphomas. Sensitivity of 1-5% was demonstrated by serially diluting Jurkat cells in mononuclear blood cells from normal individuals. We conclude that nonradioactive PCR-SSCP for TCR-gamma gene rearrangement analysis is a useful adjunct to routine histological and immunophenotypic methods in the diagnosis of T-cell lymphoproliferative disorders in paraffin-embedded tissue.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-1342963, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-1648975, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-1846996, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-2141626, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-2236063, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-2495724, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-2687159, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-2820713, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-2938743, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-2961609, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-2969758, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-3003579, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-3431470, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-6220406, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-7537311, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-7551290, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-7786801, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-7795237, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-7856738, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-7884584, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-7930595, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8027579, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8061894, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8193362, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8199020, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8207989, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8367279, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8409516, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8727099, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8757524, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8919539, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8955617, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-8955623, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-9111164, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-9505280, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-9584077, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-9591703, http://linkedlifedata.com/resource/pubmed/commentcorrection/9916920-9916911
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
AIM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jan
pubmed:issn
0002-9440
pubmed:author
pubmed:issnType
Print
pubmed:volume
154
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
67-75
pubmed:dateRevised
2010-9-13
pubmed:meshHeading
pubmed:year
1999
pubmed:articleTitle
Detection of clonal T-cell receptor gamma gene rearrangements in paraffin-embedded tissue by polymerase chain reaction and nonradioactive single-strand conformational polymorphism analysis.
pubmed:affiliation
Department of Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, USA.
pubmed:publicationType
Journal Article, Comment