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rdf:type |
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lifeskim:mentions |
umls-concept:C0008051,
umls-concept:C0012872,
umls-concept:C0020792,
umls-concept:C0023746,
umls-concept:C0029974,
umls-concept:C0032659,
umls-concept:C0033268,
umls-concept:C0332306,
umls-concept:C0332529,
umls-concept:C0439792,
umls-concept:C0599883,
umls-concept:C0680536,
umls-concept:C0934502
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pubmed:dateCreated |
2009-7-17
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pubmed:abstractText |
The genome sequence and a high-density SNP map are now available for the chicken and can be used to identify genetic markers for use in marker-assisted selection (MAS). Effective MAS requires high linkage disequilibrium (LD) between markers and quantitative trait loci (QTL), and sustained marker-QTL LD over generations. This study used data from a 3,000 SNP panel to assess the level and consistency of LD between single nucleotide polymorphisms (SNPs) over consecutive years in two egg-layer chicken lines, and analyzed one line by two methods (SNP-wise association and genome-wise Bayesian analysis) to identify markers associated with egg-quality and egg-production phenotypes.
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pubmed:commentsCorrections |
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-10207056,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-10380182,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-10380183,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-10380184,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-10380190,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-10894548,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-10894549,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-10899128,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-10959837,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-10977096,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-11108481,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-11262961,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-11309124,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-11390643,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-11395518,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-11572776,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-12101404,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-12399584,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-14534183,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-15287978,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-15308537,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-15374868,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-15513997,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-18433926,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-18601736,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-18973690,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-7475117,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-7565744,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-8497280,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-9023339,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-9419376,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-9697168,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-9702192,
http://linkedlifedata.com/resource/pubmed/commentcorrection/19607653-9915498
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pubmed:language |
eng
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pubmed:journal |
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pubmed:citationSubset |
IM
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pubmed:chemical |
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pubmed:status |
MEDLINE
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pubmed:issn |
1471-2164
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pubmed:author |
pubmed-author:AbashtBehnamB,
pubmed-author:ArangoJesusJ,
pubmed-author:DekkersJack C MJC,
pubmed-author:FernandoRohan LRL,
pubmed-author:FultonJanet EJE,
pubmed-author:HabierDavidD,
pubmed-author:HassenAbebeA,
pubmed-author:LamontSusan JSJ,
pubmed-author:O'SullivanNeil PNP,
pubmed-author:SandfordErinE,
pubmed-author:SettarPetekP
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pubmed:issnType |
Electronic
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pubmed:volume |
10 Suppl 2
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
S2
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pubmed:dateRevised |
2010-11-1
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pubmed:meshHeading |
pubmed-meshheading:19607653-Animals,
pubmed-meshheading:19607653-Bayes Theorem,
pubmed-meshheading:19607653-Breeding,
pubmed-meshheading:19607653-Chickens,
pubmed-meshheading:19607653-Eggs,
pubmed-meshheading:19607653-Genetic Markers,
pubmed-meshheading:19607653-Genetics, Population,
pubmed-meshheading:19607653-Genome,
pubmed-meshheading:19607653-Genotype,
pubmed-meshheading:19607653-Linkage Disequilibrium,
pubmed-meshheading:19607653-Models, Genetic,
pubmed-meshheading:19607653-Phenotype,
pubmed-meshheading:19607653-Polymorphism, Single Nucleotide,
pubmed-meshheading:19607653-Quantitative Trait Loci,
pubmed-meshheading:19607653-Regression Analysis
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pubmed:year |
2009
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pubmed:articleTitle |
Extent and consistency of linkage disequilibrium and identification of DNA markers for production and egg quality traits in commercial layer chicken populations.
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pubmed:affiliation |
Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, IA 50011, USA. abasht@iastate.edu
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, Non-P.H.S.
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