pubmed-article:19054371 | rdf:type | pubmed:Citation | lld:pubmed |
pubmed-article:19054371 | lifeskim:mentions | umls-concept:C0032659 | lld:lifeskim |
pubmed-article:19054371 | lifeskim:mentions | umls-concept:C0205147 | lld:lifeskim |
pubmed-article:19054371 | lifeskim:mentions | umls-concept:C0019721 | lld:lifeskim |
pubmed-article:19054371 | lifeskim:mentions | umls-concept:C0024518 | lld:lifeskim |
pubmed-article:19054371 | lifeskim:mentions | umls-concept:C1708726 | lld:lifeskim |
pubmed-article:19054371 | lifeskim:mentions | umls-concept:C0002085 | lld:lifeskim |
pubmed-article:19054371 | lifeskim:mentions | umls-concept:C0008115 | lld:lifeskim |
pubmed-article:19054371 | lifeskim:mentions | umls-concept:C0023746 | lld:lifeskim |
pubmed-article:19054371 | lifeskim:mentions | umls-concept:C0456387 | lld:lifeskim |
pubmed-article:19054371 | lifeskim:mentions | umls-concept:C1882417 | lld:lifeskim |
pubmed-article:19054371 | lifeskim:mentions | umls-concept:C0441587 | lld:lifeskim |
pubmed-article:19054371 | pubmed:issue | 6 | lld:pubmed |
pubmed-article:19054371 | pubmed:dateCreated | 2008-12-4 | lld:pubmed |
pubmed-article:19054371 | pubmed:abstractText | In this study, we investigated the five polymorphic Alu loci located within human major histocompatibility complex (MHC) class I region in 445 individuals from four distinct Chinese populations: Hunan Han, Inner Mongolia Han, Inner Mongolia Mongol and Guangdong Han populations, with an emphasis on the linkage disequilibrium (LD) between Alu insertions and human leukocyte antigen (HLA)-A, Cw and B loci in a southern (Hunan Province) and a northern (Inner Mongolia Autonomous Region) Chinese Han population. Our data showed that (a) the allele and haplotype frequencies of Alu and HLA-A loci did not differ significantly between the two southern Chinese Han populations and showed remarkable homogeneity in the two northern Chinese populations; (b) AluyHG had the highest insertion rate and HLA-A*02 harboring the single AluyHG insertion was most frequent among Alu insertion-bearing haplotypes in all four populations; (c) haplotypes AluyHF insertion-HLA-A*26, AluyHG insertion-HLA-A*02 and AluyHJ insertion-HLA-A*24 were in significant LD across the four groups and (d) haplotype AluyMICB insertion-HLA-Cw*06 was in significant LD in both populations, while significant LD of haplotypes AluyMICB insertion-HLA-B*54 and AluyMICB insertion-HLA-B*48 was only observed in the Hunan Han population and the Inner Mongolia Han population, respectively. Haplotype HLA-B*48-MICA gene deletion-AluyMICB insertion was observed at a frequency of about 3.85% in the latter population. Our data, together with previous reports on several Asian-Oceanian populations suggest the identity by descent of several common HLA-A allelic lineages in these modern human populations. The novel population-specific LD patterns uncovered in this study also shed new insight into HLA evolution and haplotype origin. | lld:pubmed |
pubmed-article:19054371 | pubmed:language | eng | lld:pubmed |
pubmed-article:19054371 | pubmed:journal | http://linkedlifedata.com/r... | lld:pubmed |
pubmed-article:19054371 | pubmed:citationSubset | IM | lld:pubmed |
pubmed-article:19054371 | pubmed:chemical | http://linkedlifedata.com/r... | lld:pubmed |
pubmed-article:19054371 | pubmed:chemical | http://linkedlifedata.com/r... | lld:pubmed |
pubmed-article:19054371 | pubmed:chemical | http://linkedlifedata.com/r... | lld:pubmed |
pubmed-article:19054371 | pubmed:status | MEDLINE | lld:pubmed |
pubmed-article:19054371 | pubmed:month | Dec | lld:pubmed |
pubmed-article:19054371 | pubmed:issn | 1399-0039 | lld:pubmed |
pubmed-article:19054371 | pubmed:author | pubmed-author:LEES BSB | lld:pubmed |
pubmed-article:19054371 | pubmed:author | pubmed-author:WangFF | lld:pubmed |
pubmed-article:19054371 | pubmed:author | pubmed-author:GógBB | lld:pubmed |
pubmed-article:19054371 | pubmed:author | pubmed-author:TibaAA | lld:pubmed |
pubmed-article:19054371 | pubmed:issnType | Electronic | lld:pubmed |
pubmed-article:19054371 | pubmed:volume | 72 | lld:pubmed |
pubmed-article:19054371 | pubmed:owner | NLM | lld:pubmed |
pubmed-article:19054371 | pubmed:authorsComplete | Y | lld:pubmed |
pubmed-article:19054371 | pubmed:pagination | 559-67 | lld:pubmed |
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pubmed-article:19054371 | pubmed:year | 2008 | lld:pubmed |
pubmed-article:19054371 | pubmed:articleTitle | Polymorphic insertions in 5 Alu loci within the major histocompatibility complex class I region and their linkage disequilibria with HLA alleles in four distinct populations in mainland China. | lld:pubmed |
pubmed-article:19054371 | pubmed:affiliation | Immunogenetics Research Group, Department of Immunology, College of Basic Medical Sciences, Central South University, Changsha, Hunan, China. tianwei2@yahoo.com | lld:pubmed |
pubmed-article:19054371 | pubmed:publicationType | Journal Article | lld:pubmed |
pubmed-article:19054371 | pubmed:publicationType | Research Support, Non-U.S. Gov't | lld:pubmed |
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