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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
11
pubmed:dateCreated
2006-5-17
pubmed:abstractText
The transcription factor serum response factor (SRF) interacts with its cofactor, MAL/MKL1, a member of the myocardin-related transcription factor (MRTF) family, through its DNA-binding domain. We define a seven-residue sequence within the conserved MAL B1 region essential and sufficient for complex formation. The neighboring Q-box sequence facilitates this interaction. The B1 and Q-box regions also have antagonistic effects on MAL nuclear import, but the residues involved are largely distinct. Both MAL and the ternary complex factor (TCF) family of SRF cofactors interact with a hydrophobic groove and pocket on the SRF DNA-binding domain. Unlike the TCFs, however, interaction of MAL with SRF is impaired by SRF alphaI-helix mutations that reduce DNA bending in the SRF-DNA complex. A clustered SRF alphaI-helix mutation strongly impairs MAL-SRF complex formation but does not affect DNA distortion in the MAL-SRF complex. MAL-SRF complex formation is facilitated by DNA binding. DNase I footprinting indicates that in the SRF-MAL complex MAL directly contacts DNA. These contacts, which flank the DNA sequences protected from DNase I by SRF, are required for effective MAL-SRF complex formation in gel mobility shift assays. We propose a model of MAL-SRF complex formation in which MAL interacts with SRF by the addition of a beta-strand to the SRF DNA-binding domain beta-sheet region, while SRF-induced DNA bending facilitates MAL-DNA contact.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-10064699, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-10594003, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-10723128, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-11342553, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-11344311, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-11406578, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-11431691, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-11439182, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-12019265, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-12052870, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-12242287, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-12397177, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-12509445, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-12732141, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-12809504, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-12944485, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-1339307, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-14563547, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-14565952, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-15014501, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-15118075, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-15509807, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-3524858, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-7623803, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-7630721, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-7637780, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-7744019, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-7957108, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-8139556, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-8164681, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-8193547, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-8386592, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-8422672, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-8477450, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-8628280, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-9111360, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-9121436, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-9171356, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-9405370, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-9490409, http://linkedlifedata.com/resource/pubmed/commentcorrection/16705166-9553110
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jun
pubmed:issn
0270-7306
pubmed:author
pubmed:issnType
Print
pubmed:volume
26
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
4134-48
pubmed:dateRevised
2010-11-18
pubmed:meshHeading
pubmed-meshheading:16705166-Active Transport, Cell Nucleus, pubmed-meshheading:16705166-Amino Acid Sequence, pubmed-meshheading:16705166-Animals, pubmed-meshheading:16705166-Cell Nucleus, pubmed-meshheading:16705166-DNA, pubmed-meshheading:16705166-DNA-Binding Proteins, pubmed-meshheading:16705166-Hydrophobic and Hydrophilic Interactions, pubmed-meshheading:16705166-Mice, pubmed-meshheading:16705166-Models, Molecular, pubmed-meshheading:16705166-Molecular Sequence Data, pubmed-meshheading:16705166-Mutation, pubmed-meshheading:16705166-NIH 3T3 Cells, pubmed-meshheading:16705166-Protein Binding, pubmed-meshheading:16705166-Protein Structure, Secondary, pubmed-meshheading:16705166-Protein Structure, Tertiary, pubmed-meshheading:16705166-Serum Response Factor, pubmed-meshheading:16705166-Ternary Complex Factors, pubmed-meshheading:16705166-Trans-Activators
pubmed:year
2006
pubmed:articleTitle
MAL and ternary complex factor use different mechanisms to contact a common surface on the serum response factor DNA-binding domain.
pubmed:affiliation
Transcription Laboratory, Lincoln's Inn Fields Laboratories, Cancer Research UK London Research Institute, Room 401, 44 Lincoln's Inn Fields, London WC2A 3PX, United Kingdom.
pubmed:publicationType
Journal Article
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