| Predicate | Object |
|---|---|
| rdf:type | |
| biopax3:comment |
FUNCTION: Involved in transcription-coupled repair (TCR), transcription and pre-mRNA splicing. SUBUNIT: Associates with RNA polymerase II, the TCR-specific proteins CKN1/CSA and ERCC6/CSB, and XPA. Identified in the spliceosome C complex. SUBCELLULAR LOCATION: Nucleus (By similarity). Note=Detected in the splicing complex carrying pre-mRNA (By similarity). SIMILARITY: Belongs to the crooked-neck family. SIMILARITY: Contains 14 HAT repeats. SEQUENCE CAUTION: Sequence=AAF86951.1; Type=Frameshift; Positions=314, 411, 426, 429, 468; Sequence=AAH08778.1; Type=Erroneous initiation; Note=Translation N-terminally shortened; Sequence=BAB84861.1; Type=Miscellaneous discrepancy; Note=Alternative splicing. Incomplete sequence; WEB RESOURCE: Name=NIEHS-SNPs; URL="http://egp.gs.washington.edu/data/hcnp/"; GENE SYNONYMS:XAB2 HCNP KIAA1177 SYF1. COPYRIGHT: Protein annotation is derived from the UniProt Consortium (http://www.uniprot.org/). Distributed under the Creative Commons Attribution-NoDerivs License.,
SEQUENCE 855 AA; 100010 MW; CF766917CD65F6FD CRC64;
|
| biopax3:xref |
urn:biopax:RelationshipXref:HGNC_HGNC:14089,
urn:biopax:RelationshipXref:NCBI GENE_56949,
urn:biopax:RelationshipXref:REFSEQ_NP_064581,
urn:biopax:UnificationXref:UNIPROT_Q8TET6,
urn:biopax:UnificationXref:UNIPROT_Q96HB0,
urn:biopax:UnificationXref:UNIPROT_Q96IW0,
urn:biopax:UnificationXref:UNIPROT_Q9HCS7,
urn:biopax:UnificationXref:UNIPROT_Q9NRG6,
urn:biopax:UnificationXref:UNIPROT_Q9ULP3
|
| biopax3:displayName |
SYF1_HUMAN
|
| biopax3:name |
Protein HCNP,
XAB2,
XPA-binding protein 2
|
| biopax3:entityFeature | |
| biopax3:organism | |
| biopax3:sequence |
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLAAEAERDQPLRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLEQQSVPAAVFGSLKED
|
| biopax3:standardName |
Pre-mRNA-splicing factor SYF1
|