Predicate | Object |
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rdf:type | |
biopax3:comment |
FUNCTION: May regulate the disassembly of focal adhesions. May localize receptor-like tyrosine phosphatases type 2A at specific sites on the plasma membrane, possibly regulating their interaction with the extracellular environment and their association with substrates. SUBUNIT: Forms homodimers and heterodimers with liprins-alpha and liprins-beta. Interacts with the second PTPase domain of PTPRD, PTPRF and PTPRS. Interacts with GIT1, KIF1A and GRIP1 (By similarity). SUBCELLULAR LOCATION: Cytoplasm. Note=Colocalizes with PTPRF at the ends of focal adhesions most proximal to the cell nucleus. ALTERNATIVE PRODUCTS: Event=Alternative splicing; Named isoforms=2; Name=1; Synonyms=LAR-interacting protein 1b, LIP.1b, b; IsoId=Q13136-1; Sequence=Displayed; Name=2; Synonyms=LAR-interacting protein 1a, LIP.1a, a; IsoId=Q13136-2; Sequence=VSP_009391; Note=Due to intron retention. No experimental confirmation available; TISSUE SPECIFICITY: Ubiquitous. DOMAIN: The N-terminal coiled coil regions mediate homodimerization preferentially and heterodimerization type alpha/alpha. The C-terminal, non-coiled coil regions mediate heterodimerization type alpha/beta and interaction with PTPRD, PTPRF and PTPRS. PTM: Phosphorylated upon DNA damage, probably by ATM or ATR. SIMILARITY: Belongs to the liprin family. Liprin-alpha subfamily. SIMILARITY: Contains 3 SAM (sterile alpha motif) domains. SEQUENCE CAUTION: Sequence=BAA08353.1; Type=Frameshift; Positions=1033, 1041, 1045, 1067, 1113; GENE SYNONYMS:PPFIA1 LIP1. COPYRIGHT: Protein annotation is derived from the UniProt Consortium (http://www.uniprot.org/). Distributed under the Creative Commons Attribution-NoDerivs License.,
SEQUENCE 1202 AA; 135779 MW; C8CF7C20B298BFB1 CRC64;
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biopax3:xref |
urn:biopax:RelationshipXref:HGNC_HGNC:9245,
urn:biopax:RelationshipXref:NCBI GENE_8500,
urn:biopax:RelationshipXref:REFSEQ_NP_003617,
urn:biopax:RelationshipXref:REFSEQ_NP_803172,
urn:biopax:UnificationXref:UNIPROT_A6NLE3,
urn:biopax:UnificationXref:UNIPROT_Q13135,
urn:biopax:UnificationXref:UNIPROT_Q13136,
urn:biopax:UnificationXref:UNIPROT_Q14567,
urn:biopax:UnificationXref:UNIPROT_Q8N4I2
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biopax3:displayName |
LIPA1_HUMAN
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biopax3:name |
LAR-interacting protein 1,
LIP-1,
PPFIA1,
PTPRF-interacting protein alpha-1,
Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-1
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biopax3:entityFeature |
urn:biopax:ModificationFeature:LIPA1_HUMAN_1,
urn:biopax:ModificationFeature:LIPA1_HUMAN_10,
urn:biopax:ModificationFeature:LIPA1_HUMAN_11,
urn:biopax:ModificationFeature:LIPA1_HUMAN_12,
urn:biopax:ModificationFeature:LIPA1_HUMAN_13,
urn:biopax:ModificationFeature:LIPA1_HUMAN_2,
urn:biopax:ModificationFeature:LIPA1_HUMAN_3,
urn:biopax:ModificationFeature:LIPA1_HUMAN_4,
urn:biopax:ModificationFeature:LIPA1_HUMAN_5,
urn:biopax:ModificationFeature:LIPA1_HUMAN_6,
urn:biopax:ModificationFeature:LIPA1_HUMAN_7,
urn:biopax:ModificationFeature:LIPA1_HUMAN_8,
urn:biopax:ModificationFeature:LIPA1_HUMAN_9
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biopax3:organism | |
biopax3:sequence |
MMCEVMPTISEAEGPPGGGGGHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGVLDINHEQENTPSTSGKRSSDGSLSHEEDLAKVIELQEIISKQSREQSQMKERLASLSSHVTELEEDLDTARKDLIKSEEMNTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSMHRQTEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLREVESAKKQLEETQHDKDQLVLNIEALRAELDHMRLRGASLHHGRPHLGSVPDFRFPMADGHTDSYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDADVSDGEDDRDTLLSSVDLLSPSGQADAHTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIESRVGSGSLDNLGRFRSMSSIPPYPASSLASSSPPGSGRSTPRRIPHSPAREVDRLGVMTLLPPSREEVRDDKTTIKCETSPPSSPRALRLDRLHKGALHTVSHEDIRDIRNSTGSQDGPVSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGQTGKEALGQAGVSETDNSSQDALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREESQSEIKDVLVWSNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFSALALLLQIPTQNTQARAVLEREFNNLLVMGTDRRFDEDDDKSFRRAPSWRKKFRPKDIRGLAAGSAETLPANFRVTSSMSSPSMQPKKMQMDGNVSGTQRLDSATVRTYSC
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biopax3:standardName |
Liprin-alpha-1
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