Predicate | Object |
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rdf:type | |
biopax3:comment |
FUNCTION: Type V collagen is a member of group I collagen (fibrillar forming collagen). It is a minor connective tissue component of nearly ubiquitous distribution. Type V collagen binds to DNA, heparan sulfate, thrombospondin, heparin, and insulin. SUBUNIT: Trimers of two alpha 1(V) and one alpha 2(V) chains in most tissues and trimers of one alpha 1(V), one alpha 2(V), and one alpha 3(V) chains in placenta. Interacts with CSPG4. SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular matrix (By similarity). PTM: Prolines at the third position of the tripeptide repeating unit (G-X-Y) are hydroxylated in some or all of the chains. PTM: Sulfated on 40% of tyrosines. DISEASE: Defects in COL5A1 are a cause of Ehlers-Danlos syndrome type 1 (EDS1) [MIM:130000]; also known as Ehlers-Danlos syndrome gravis or severe classic type Ehlers-Danlos syndrome. EDS is a connective tissue disorder characterized by hyperextensible skin, atrophic cutaneous scars due to tissue fragility and joint hyperlaxity. EDS1 is the severe form of classic Ehlers-Danlos syndrome. DISEASE: Defects in COL5A1 are a cause of Ehlers-Danlos syndrome type 2 (EDS2) [MIM:130010]; also known as Ehlers-Danlos syndrome mitis or mild classic type Ehlers Danlos syndrome. SIMILARITY: Belongs to the fibrillar collagen family. SIMILARITY: Contains 1 fibrillar collagen NC1 domain. SIMILARITY: Contains 1 laminin G-like domain. WEB RESOURCE: Name=GeneReviews; URL="http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/COL5A1"; GENE SYNONYMS:COL5A1. COPYRIGHT: Protein annotation is derived from the UniProt Consortium (http://www.uniprot.org/). Distributed under the Creative Commons Attribution-NoDerivs License.,
SEQUENCE 1838 AA; 183560 MW; 8F18AB0B91B3A0C7 CRC64;
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biopax3:xref | |
biopax3:displayName |
CO5A1_HUMAN
|
biopax3:name |
COL5A1
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biopax3:entityFeature |
urn:biopax:ModificationFeature:CO5A1_HUMAN_1,
urn:biopax:ModificationFeature:CO5A1_HUMAN_10,
urn:biopax:ModificationFeature:CO5A1_HUMAN_11,
urn:biopax:ModificationFeature:CO5A1_HUMAN_12,
urn:biopax:ModificationFeature:CO5A1_HUMAN_13,
urn:biopax:ModificationFeature:CO5A1_HUMAN_14,
urn:biopax:ModificationFeature:CO5A1_HUMAN_15,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_17,
urn:biopax:ModificationFeature:CO5A1_HUMAN_18,
urn:biopax:ModificationFeature:CO5A1_HUMAN_19,
urn:biopax:ModificationFeature:CO5A1_HUMAN_2,
urn:biopax:ModificationFeature:CO5A1_HUMAN_20,
urn:biopax:ModificationFeature:CO5A1_HUMAN_21,
urn:biopax:ModificationFeature:CO5A1_HUMAN_22,
urn:biopax:ModificationFeature:CO5A1_HUMAN_23,
urn:biopax:ModificationFeature:CO5A1_HUMAN_24,
urn:biopax:ModificationFeature:CO5A1_HUMAN_25,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_27,
urn:biopax:ModificationFeature:CO5A1_HUMAN_28,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_3,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_38,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_4,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_41,
urn:biopax:ModificationFeature:CO5A1_HUMAN_42,
urn:biopax:ModificationFeature:CO5A1_HUMAN_43,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_46,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_48,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_5,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_52,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_57,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_59,
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urn:biopax:ModificationFeature:CO5A1_HUMAN_61,
urn:biopax:ModificationFeature:CO5A1_HUMAN_62,
urn:biopax:ModificationFeature:CO5A1_HUMAN_63,
urn:biopax:ModificationFeature:CO5A1_HUMAN_64,
urn:biopax:ModificationFeature:CO5A1_HUMAN_65,
urn:biopax:ModificationFeature:CO5A1_HUMAN_66,
urn:biopax:ModificationFeature:CO5A1_HUMAN_67,
urn:biopax:ModificationFeature:CO5A1_HUMAN_68,
urn:biopax:ModificationFeature:CO5A1_HUMAN_69,
urn:biopax:ModificationFeature:CO5A1_HUMAN_7,
urn:biopax:ModificationFeature:CO5A1_HUMAN_70,
urn:biopax:ModificationFeature:CO5A1_HUMAN_71,
urn:biopax:ModificationFeature:CO5A1_HUMAN_72,
urn:biopax:ModificationFeature:CO5A1_HUMAN_73,
urn:biopax:ModificationFeature:CO5A1_HUMAN_74,
urn:biopax:ModificationFeature:CO5A1_HUMAN_8,
urn:biopax:ModificationFeature:CO5A1_HUMAN_9
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biopax3:organism | |
biopax3:sequence |
MDVHTRWKARSALRPGAPLLPPLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGITKTTGFCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDHPMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQDPNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAAKETTEVPEELTPTPTEAAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEGEENPDQPTDPGAGAEIPTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTCVFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQNVTYHCYQSVAWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFMG
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biopax3:standardName |
Collagen alpha-1(V) chain
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