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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
20
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pubmed:dateCreated |
1998-12-7
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pubmed:abstractText |
The cytosine-rich strand of the Tetrahymena telomere consists of multiple repeats of sequence d(AACCCC). We have solved the crystal structure of the crystalline repeat sequence at 2.5 A resolution. The adenines form two different and previously unknown clusters (A clusters) in orthogonal directions with their counterparts from other strands, each containing a total of eight adenines. The clusters appear to be stable aggregates held together by base stacking and three different base-pairing modes. Two different types of cytosine tetraplexes are found in the crystal. Each four-stranded complex is composed of two intercalated parallel-stranded duplexes pointing in opposite directions, with hemiprotonated cytosine-cytosine (C.C+) base pairs. The outermost C.C+base pairs are from the 5'-end of each strand in one cytosine tetraplex and from the 3'-end of each strand in the other. The A clusters and the cytosine tetraplexes form two alternating stacking patterns, creating continuous base stacking in two perpendicular directions along the x - and z -axes. The adenine clusters could be organizational motifs for macromolecular RNA.
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pubmed:keyword | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Oct
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pubmed:issn |
0305-1048
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
15
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pubmed:volume |
26
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
4696-705
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pubmed:dateRevised |
2008-11-20
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pubmed:meshHeading |
pubmed-meshheading:9753739-Adenine,
pubmed-meshheading:9753739-Animals,
pubmed-meshheading:9753739-Base Pairing,
pubmed-meshheading:9753739-Crystallization,
pubmed-meshheading:9753739-Crystallography, X-Ray,
pubmed-meshheading:9753739-Cytosine,
pubmed-meshheading:9753739-DNA, Protozoan,
pubmed-meshheading:9753739-Electrons,
pubmed-meshheading:9753739-Models, Molecular,
pubmed-meshheading:9753739-Nucleic Acid Conformation,
pubmed-meshheading:9753739-Telomere,
pubmed-meshheading:9753739-Tetrahymena
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pubmed:year |
1998
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pubmed:articleTitle |
Intercalated cytosine motif and novel adenine clusters in the crystal structure of the Tetrahymena telomere.
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pubmed:affiliation |
Department of Biology, Room 68-233, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, P.H.S.,
Research Support, U.S. Gov't, Non-P.H.S.
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