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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
32
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pubmed:dateCreated |
1994-9-29
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pubmed:abstractText |
Conformational preferences of synthetic peptides that span the complete sequence of Chironomus thummi hemoglobin (Chi t I) component III were studied by nuclear magnetic resonance (NMR) and CD spectroscopies. The peptides, 19-21 amino acids in length, were studied in water, except for the C-terminal peptide, which was investigated in DMSO-d6. NMR showed that all investigated peptides lacked uniquely folded conformations in water at 4 degrees C and pH 3.0 or at 10 degrees C and pD 6.6 in DMSO. However, some preferential helix-like conformations for the peptides corresponding to the helices of the folded protein could be seen in solution. These peptides showed characteristic interactions for conformations in both the beta- and alpha-regions of phi-psi space, based on strong C alpha H(i)-NH(i + 1) interactions, and on NH-NH, C alpha H(i)-NH-(i + 2), C alpha H(i)-NH(i + 3), and C alpha H(i)-C beta H(i + 3) interactions, respectively. Helical motifs seem not to be the most important factors in determining MHC-binding and/or T-cell recognition. However, there is a tendency that more stabilized secondary structures show higher T-cell stimulation.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Allergens,
http://linkedlifedata.com/resource/pubmed/chemical/Chi t I allergen,
http://linkedlifedata.com/resource/pubmed/chemical/Hemoglobins,
http://linkedlifedata.com/resource/pubmed/chemical/Insect Proteins,
http://linkedlifedata.com/resource/pubmed/chemical/Peptide Fragments
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pubmed:status |
MEDLINE
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pubmed:month |
Aug
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pubmed:issn |
0006-2960
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
16
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pubmed:volume |
33
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
9420-7
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pubmed:dateRevised |
2007-11-15
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pubmed:meshHeading |
pubmed-meshheading:8068617-Allergens,
pubmed-meshheading:8068617-Amino Acid Sequence,
pubmed-meshheading:8068617-Animals,
pubmed-meshheading:8068617-Chironomidae,
pubmed-meshheading:8068617-Circular Dichroism,
pubmed-meshheading:8068617-Hemoglobins,
pubmed-meshheading:8068617-Insect Proteins,
pubmed-meshheading:8068617-Lymphocyte Activation,
pubmed-meshheading:8068617-Magnetic Resonance Spectroscopy,
pubmed-meshheading:8068617-Molecular Sequence Data,
pubmed-meshheading:8068617-Peptide Fragments,
pubmed-meshheading:8068617-Protein Structure, Secondary,
pubmed-meshheading:8068617-Solubility,
pubmed-meshheading:8068617-Structure-Activity Relationship,
pubmed-meshheading:8068617-T-Lymphocytes
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pubmed:year |
1994
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pubmed:articleTitle |
Conformations of peptide fragments comprising the complete sequence of component III of Chi t I and their relationship to T-cell stimulation.
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pubmed:affiliation |
Max-Planck-Institut für Biochemie, Martinsried bei München, FRG.
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pubmed:publicationType |
Journal Article,
Comparative Study
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