Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:dateCreated
1995-8-18
pubmed:databankReference
pubmed:abstractText
We have identified a Xenopus cDNA, XS-2, by screening a Xenopus embryonic stage-22-24 cDNA library with a DNA probe encoding the transmembrane and cytoplasmic domains of mouse syndecan 1. The 1.4 kb cDNA consists of an open reading frame of 642 nucleotides encoding a protein of 191 amino acids. The predicted protein of 20869 Da contains a 25-amino acid putative transmembrane domain and a 32-amino acid putative cytoplasmic domain, both of which are highly similar to the corresponding regions of rat syndecan 2 (92% identity) and to a lesser degree those of rat syndecans 1, 3 and 4 (62, 64 and 78% respectively). The putative N-terminal ectodomain contains a possible attachment site for heparan sulphate, identical with the comparable glycosaminoglycan-attachment sequence of rat syndecan 2. Polyclonal antisera raised against recombinant ectodomain of XS-2, expressed as a fusion protein, recognized a heparan sulphate proteoglycan in XTC cell-culture medium. This proteoglycan bound to DEAE-Sephacel and was eluted with 1 M NaCl; digestion with heparitinase but not chondroitinase ABC resulted in the identification of a 46 kDa protein by these antisera. Northern-blot analysis indicated that XS-2 identifies two Xenopus mRNA species approx. 4 and 2 kb in size in embryos ranging in maturation from the 64-cell stage to stage 54. These results demonstrate that a heparan sulphate proteoglycan, similar to syndecan 2, is expressed during Xenopus embryogenesis.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1282351, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1374313, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1423628, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1537865, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1639809, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1644217, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1646484, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1649700, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1698781, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1740437, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1765004, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-1847668, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-2007624, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-2015796, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-2120240, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-2144898, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-2452727, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-2494194, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-2645293, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-2835370, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-2940242, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-2963012, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-3047011, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-3131880, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-3159726, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-3472204, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-6772444, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-7108955, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-7519155, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-8159748, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-8187643, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-8307953, http://linkedlifedata.com/resource/pubmed/commentcorrection/7619084-8344959
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jul
pubmed:issn
0264-6021
pubmed:author
pubmed:issnType
Print
pubmed:day
1
pubmed:volume
309 ( Pt 1)
pubmed:geneSymbol
XS-2
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
69-76
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
1995
pubmed:articleTitle
Expression of a Xenopus counterpart of mammalian syndecan 2 during embryogenesis.
pubmed:affiliation
Division of Nephrology, Hospital for Sick Children, University of Toronto, Ont., Canada.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S.