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rdf:type |
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lifeskim:mentions |
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pubmed:issue |
7
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pubmed:dateCreated |
1995-11-27
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pubmed:databankReference |
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06756,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06757,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06758,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06759,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06760,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06761,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06762,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06763,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06764,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06765,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06766,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06767,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06768,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06769,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06770,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06771,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06772,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06773,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06774,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06775,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06776,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06777,
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/U06778
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pubmed:abstractText |
Approximately 24% (170/710) of porcine (dG-dT)n.(dC-dA)n microsatellites isolated in our laboratory are associated with a previously described porcine Short Interdispersed Element (SINE) termed PRE-1 SINE. Another 5.6% (40/710) of the microsatellites were adjacent to two previously unidentified SINE sequences, which we have designated ARE-1P (Artiodactyl Repetitive Element-1 Porcine) and ARE-2P. The ARE repeats were also found in bovine microsatellite and genomic sequences in the GenBank database. Genotypic information was obtained from 68.9% of primers where at least one primer sequence was obtained from the PRE-1 SINE and 66.6% of primer pairs designed from the ARE SINEs. The use of primers derived from SINEs significantly increases the number of primer pairs available for genetic linkage studies in swine.
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pubmed:language |
eng
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pubmed:journal |
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pubmed:citationSubset |
IM
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pubmed:chemical |
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pubmed:status |
MEDLINE
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pubmed:month |
Jul
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pubmed:issn |
0938-8990
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pubmed:author |
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pubmed:issnType |
Print
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pubmed:volume |
6
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
464-8
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:7579888-Animals,
pubmed-meshheading:7579888-Artiodactyla,
pubmed-meshheading:7579888-Base Sequence,
pubmed-meshheading:7579888-Cattle,
pubmed-meshheading:7579888-Consensus Sequence,
pubmed-meshheading:7579888-DNA Primers,
pubmed-meshheading:7579888-Genotype,
pubmed-meshheading:7579888-Microsatellite Repeats,
pubmed-meshheading:7579888-Molecular Sequence Data,
pubmed-meshheading:7579888-Sequence Alignment,
pubmed-meshheading:7579888-Sheep,
pubmed-meshheading:7579888-Swine
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pubmed:year |
1995
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pubmed:articleTitle |
Porcine SINE-associated microsatellite markers: evidence for new artiodactyl SINEs.
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pubmed:affiliation |
United States Department of Agriculture, ARS, Roman L. Hruska U.S. Meat Animal Research Center, Clay Center, Nebraska 68933, USA.
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pubmed:publicationType |
Journal Article,
Comparative Study
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