Switch to
Predicate | Object |
---|---|
rdf:type | |
lifeskim:mentions | |
pubmed:issue |
44
|
pubmed:dateCreated |
1995-12-18
|
pubmed:abstractText |
A novel nucleic acid secondary structure, exemplified by d(A(+)-G)10, is formed by an intramolecular, cooperative, acid-induced, coil-->helix transition. The helix is apparently left-handed, lacks base stacking and pairing, and is maintained by hydrogen and ionic bonds between dA+ "side-chain" residues (with electropositive hydrogens -N6H2, -N1+H) and the phosphodiester backbone. Modeling indicates that those dA+ residues lie approximately parallel to the helix axis, interacting with the n-1 backbone phosphates (with electronegative oxygens), somewhat like the -C=O...H-N- longitudinal interactions in a protein alpha-helix. Moreover, the intervening dG side-chain residues are extrahelical, as are amino acid side chains of an alpha-helix.
|
pubmed:grant | |
pubmed:language |
eng
|
pubmed:journal | |
pubmed:citationSubset |
IM
|
pubmed:chemical | |
pubmed:status |
MEDLINE
|
pubmed:month |
Nov
|
pubmed:issn |
0006-2960
|
pubmed:author | |
pubmed:issnType |
Print
|
pubmed:day |
7
|
pubmed:volume |
34
|
pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
|
pubmed:pagination |
14293-9
|
pubmed:dateRevised |
2007-11-14
|
pubmed:meshHeading |
pubmed-meshheading:7578032-Animals,
pubmed-meshheading:7578032-DNA, Single-Stranded,
pubmed-meshheading:7578032-Humans,
pubmed-meshheading:7578032-Hydrogen Bonding,
pubmed-meshheading:7578032-Ions,
pubmed-meshheading:7578032-Models, Molecular,
pubmed-meshheading:7578032-Molecular Structure,
pubmed-meshheading:7578032-Nucleic Acid Conformation,
pubmed-meshheading:7578032-Polydeoxyribonucleotides
|
pubmed:year |
1995
|
pubmed:articleTitle |
Alpha-DNA, a single-stranded secondary structure stabilized by ionic and hydrogen bonds: d(A(+)-G)n.
|
pubmed:affiliation |
Department of Molecular Biology, Princeton University, New Jersey 08544-1014, USA.
|
pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, P.H.S.,
Research Support, Non-U.S. Gov't
|