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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:dateCreated |
1990-1-3
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pubmed:abstractText |
We have determined the complete nucleotide sequence of coxsackievirus A21 (CAV-21), the first member of this enterovirus subgroup to be analysed in molecular detail. The sequence, which is 7401 nucleotides long, encodes an open reading frame of 2206 codons, preceded by a 5' non-coding region of 711 nucleotides and followed by a 3' non-coding region of 72 nucleotides plus a poly(A) tract. The most striking feature is the remarkable homology to the poliovirus (greater than 90% at the amino acid level) in the 3' part of the genome. The rest of the genome is much less homologous, suggesting that CAV-21 is a recombinant virus. Rhinovirus-like characteristics, including the length of the 5' non-coding region and a slight --U/--A imbalance in codon usage, may be related to the fact that CAV-21, like rhinoviruses, infects the upper respiratory tract. However, the sequence sheds little light on the molecular basis of the shared receptor specificity.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Nov
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pubmed:issn |
0022-1317
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
70 ( Pt 11)
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
2943-52
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:2584950-Amino Acid Sequence,
pubmed-meshheading:2584950-Base Composition,
pubmed-meshheading:2584950-Base Sequence,
pubmed-meshheading:2584950-Codon,
pubmed-meshheading:2584950-Enterovirus,
pubmed-meshheading:2584950-Genes, Viral,
pubmed-meshheading:2584950-Molecular Sequence Data,
pubmed-meshheading:2584950-Protein Processing, Post-Translational,
pubmed-meshheading:2584950-Proteins,
pubmed-meshheading:2584950-RNA, Viral,
pubmed-meshheading:2584950-Sequence Homology, Nucleic Acid,
pubmed-meshheading:2584950-Viral Structural Proteins
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pubmed:year |
1989
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pubmed:articleTitle |
The complete nucleotide sequence of coxsackievirus A21.
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pubmed:affiliation |
Department of Biology, University of Essex, Wivenhoe Park, Colchester, U.K.
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pubmed:publicationType |
Journal Article,
Comparative Study,
Research Support, Non-U.S. Gov't
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