Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
26
pubmed:dateCreated
2010-7-1
pubmed:abstractText
Recent advances in the analysis of neuronal activities suggest that the instantaneous activity patterns can be mostly explained by considering only first-order and pairwise interactions between recorded elements, i.e., action potentials or local field potentials (LFP), and do not require higher-than-pairwise-order interactions. If generally applicable, this pairwise approach greatly simplifies the description of network interactions. However, an important question remains: are the recorded elements the units of interaction that best describe neuronal activity patterns? To explore this, we recorded spontaneous LFP peak activities in cortical organotypic cultures using planar, integrated 60-microelectrode arrays. We compared predictions obtained using a pairwise approach with those using a hierarchical approach that uses two different spatial units for describing the activity interactions: single electrodes and electrode clusters. In this hierarchical model, short-range interactions within each cluster were modeled by pairwise interactions of electrode activities and long-range interactions were modeled by pairwise interactions of cluster activities. Despite the relatively low number of parameters used, the hierarchical model provided a more accurate description of the activity patterns than the pairwise model when applied to ensembles of 10 electrodes. Furthermore, the hierarchical model was successfully applied to a larger-scale data of approximately 60 electrodes. Electrode activities within clusters were highly correlated and spatially contiguous. In contrast, long-range interactions were diffuse, suggesting the presence of higher-than-pairwise-order interactions involved in the LFP peak activities. Thus, the identification of appropriate units of interaction may allow for the successful characterization of neuronal activities in large-scale networks.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-10591212, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-10910158, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-11110130, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-11483997, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-11856557, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-12142549, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-12396564, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-12590822, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-14657176, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-14683220, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-14990509, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-15175392, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-15486288, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-15718474, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-15879220, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-16625187, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-16885228, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-16899720, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-16914671, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-17226088, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-17275102, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-17709240, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-18000059, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-18082894, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-18160425, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-18184793, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-18339943, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-18499802, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-18650810, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-18669590, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-18957215, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-19242557, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-19369571, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-19424487, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-19620125, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-19717463, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-2568942, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-3755256, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-4595850, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-6953413, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-7472441, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-7605074, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-8219726, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-8283219, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-8710163, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-8848173, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-901864, http://linkedlifedata.com/resource/pubmed/commentcorrection/20592194-9412506
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:status
MEDLINE
pubmed:month
Jun
pubmed:issn
1529-2401
pubmed:author
pubmed:issnType
Electronic
pubmed:day
30
pubmed:volume
30
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
8720-33
pubmed:dateRevised
2011-7-25
pubmed:meshHeading
pubmed:year
2010
pubmed:articleTitle
Hierarchical interaction structure of neural activities in cortical slice cultures.
pubmed:affiliation
Laboratory for Integrated Theoretical Neuroscience, RIKEN Brain Science Institute, Wako, Saitama 351-0198, Japan.
pubmed:publicationType
Journal Article, In Vitro, Research Support, Non-U.S. Gov't