Source:http://linkedlifedata.com/resource/pubmed/id/19759197
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
22
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pubmed:dateCreated |
2009-11-5
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pubmed:abstractText |
The molecular complexity of a tumor manifests itself at the genomic, epigenomic, transcriptomic and proteomic levels. Genomic profiling at these multiple levels should allow an integrated characterization of tumor etiology. However, there is a shortage of effective statistical and bioinformatic tools for truly integrative data analysis. The standard approach to integrative clustering is separate clustering followed by manual integration. A more statistically powerful approach would incorporate all data types simultaneously and generate a single integrated cluster assignment.
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pubmed:grant | |
pubmed:commentsCorrections | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:status |
MEDLINE
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pubmed:month |
Nov
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pubmed:issn |
1367-4811
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pubmed:author | |
pubmed:issnType |
Electronic
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pubmed:day |
15
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pubmed:volume |
25
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
2906-12
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pubmed:dateRevised |
2010-11-22
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pubmed:meshHeading |
pubmed-meshheading:19759197-Algorithms,
pubmed-meshheading:19759197-Breast Neoplasms,
pubmed-meshheading:19759197-Cluster Analysis,
pubmed-meshheading:19759197-Computational Biology,
pubmed-meshheading:19759197-DNA Copy Number Variations,
pubmed-meshheading:19759197-Databases, Genetic,
pubmed-meshheading:19759197-Female,
pubmed-meshheading:19759197-Gene Expression Profiling,
pubmed-meshheading:19759197-Humans,
pubmed-meshheading:19759197-Lung Neoplasms,
pubmed-meshheading:19759197-Models, Statistical
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pubmed:year |
2009
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pubmed:articleTitle |
Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysis.
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pubmed:affiliation |
Department of Epidemiology and Biostatistics, Memorial Sloan-Kettering Cancer Center, New York, NY, USA. shenr@mskcc.org
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pubmed:publicationType |
Journal Article,
Research Support, N.I.H., Extramural
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