Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
2008-7-31
pubmed:abstractText
In this work, we show the photoconversion of the fluorochromes enhanced green fluorescent protein (EGFP), yellow fluorescent protein (YFP), and BODIPY into electron dense diaminobenzidine (DAB)-deposits using the examples of five different target proteins, and the lipid ceramide. High spatial resolution and specificity in the localization of the converted protein-fluorochrome complexes and the fluorochrome-labelled lipid were achieved by methodical adaptations around the DAB-photooxidation step, such as fixation, illumination, controlled DAB-precipitation, and osmium postfixation. The DAB-deposits at the plasma membrane and membranous compartments, such as endoplasmic reticulum and Golgi apparatus in combination with the fine structural preservation and high membrane contrast enabled differential topographical analyses, and allowed three-dimensional reconstructions of complex cellular architectures, such as trans-Golgi-ER junctions. On semithin sections the quality, distribution and patterns of the signals were evaluated; defined areas of interest were used for electron microscopic analyses and correlative microscopy of consecutive ultrathin sections. The results obtained with the proteins golgin 84 (G-84), protein disulfide isomerase (PDI), scavenger receptor classB type1 (SR-BI), and gamma-aminobutyric acid (GABA) transporter 1 (GAT1), on one hand closely matched with earlier immunocytochemical data and, on the other hand, led to new information about their subcellular localizations as exemplified by a completely novel sight on the subcellular distribution and kinetics of the SR-BI, and provided a major base for the forthcoming research.
pubmed:grant
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/3,3'-Diaminobenzidine, http://linkedlifedata.com/resource/pubmed/chemical/4,4-difluoro-4-bora-3a,4a-diaza-s-in..., http://linkedlifedata.com/resource/pubmed/chemical/Bacterial Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Boron Compounds, http://linkedlifedata.com/resource/pubmed/chemical/GABA Plasma Membrane Transport..., http://linkedlifedata.com/resource/pubmed/chemical/GOLGA5 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Green Fluorescent Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Luminescent Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Membrane Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Protein Disulfide-Isomerases, http://linkedlifedata.com/resource/pubmed/chemical/SCARB1 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/SLC6A1 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Scavenger Receptors, Class B, http://linkedlifedata.com/resource/pubmed/chemical/enhanced green fluorescent protein, http://linkedlifedata.com/resource/pubmed/chemical/gamma-Aminobutyric Acid, http://linkedlifedata.com/resource/pubmed/chemical/yellow fluorescent protein, Bacteria
pubmed:status
MEDLINE
pubmed:month
Aug
pubmed:issn
0948-6143
pubmed:author
pubmed:issnType
Print
pubmed:volume
130
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
407-19
pubmed:dateRevised
2011-9-30
pubmed:meshHeading
pubmed-meshheading:18463889-3,3'-Diaminobenzidine, pubmed-meshheading:18463889-Animals, pubmed-meshheading:18463889-Bacterial Proteins, pubmed-meshheading:18463889-Boron Compounds, pubmed-meshheading:18463889-CHO Cells, pubmed-meshheading:18463889-Cricetinae, pubmed-meshheading:18463889-Cricetulus, pubmed-meshheading:18463889-Electron Microscope Tomography, pubmed-meshheading:18463889-Endoplasmic Reticulum, pubmed-meshheading:18463889-Fluorescence, pubmed-meshheading:18463889-GABA Plasma Membrane Transport Proteins, pubmed-meshheading:18463889-Golgi Apparatus, pubmed-meshheading:18463889-Green Fluorescent Proteins, pubmed-meshheading:18463889-HeLa Cells, pubmed-meshheading:18463889-Humans, pubmed-meshheading:18463889-Luminescent Proteins, pubmed-meshheading:18463889-Membrane Proteins, pubmed-meshheading:18463889-Organelles, pubmed-meshheading:18463889-Protein Disulfide-Isomerases, pubmed-meshheading:18463889-Scavenger Receptors, Class B, pubmed-meshheading:18463889-gamma-Aminobutyric Acid
pubmed:year
2008
pubmed:articleTitle
Electron microscopic visualization of fluorescent signals in cellular compartments and organelles by means of DAB-photoconversion.
pubmed:affiliation
Department of Cell Biology and Ultrastructure Research, Center for Anatomy and Cell Biology, Medical University Vienna, Schwarzspanierstrasse 17, 1090, Vienna, Austria.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't