Source:http://linkedlifedata.com/resource/pubmed/id/18380490
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
18
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pubmed:dateCreated |
2008-5-1
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pubmed:abstractText |
The structure and energy of A-tetrads with N6-H6...N3 H-bonds was studied using B3LYP and BH&H density functional theory. The planar A-tetrad with C(4h) symmetry is more stable than the nonplanar structures at C4 and S4 symmetry. This structure corresponds to a local energy minimum. The energies of the structures with N6-H6...N1 and N6-H6...N7 H-bonds studied previously are of similar magnitude. Structures of A-tetrad complexes with sodium and potassium were most stable at S4 symmetry, and similarly, sandwich complexes consisting of two tetrads and a single cation were most stable at S8 symmetry. Relative energies of sandwich complexes with different symmetries obtained with the B3LYP and BH&H methods were quite different. BH&H overestimates the interaction energies between hydrogen-bonded neighbor bases relative to B3LYP.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Adenine,
http://linkedlifedata.com/resource/pubmed/chemical/Hydrogen,
http://linkedlifedata.com/resource/pubmed/chemical/Intercalating Agents,
http://linkedlifedata.com/resource/pubmed/chemical/Nitrogen,
http://linkedlifedata.com/resource/pubmed/chemical/Potassium,
http://linkedlifedata.com/resource/pubmed/chemical/Sodium
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pubmed:status |
MEDLINE
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pubmed:month |
May
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pubmed:issn |
1520-5215
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pubmed:author | |
pubmed:issnType |
Electronic
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pubmed:day |
8
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pubmed:volume |
112
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
4336-41
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pubmed:meshHeading |
pubmed-meshheading:18380490-Adenine,
pubmed-meshheading:18380490-Hydrogen,
pubmed-meshheading:18380490-Hydrogen Bonding,
pubmed-meshheading:18380490-Intercalating Agents,
pubmed-meshheading:18380490-Nitrogen,
pubmed-meshheading:18380490-Potassium,
pubmed-meshheading:18380490-Quantum Theory,
pubmed-meshheading:18380490-Sodium
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pubmed:year |
2008
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pubmed:articleTitle |
Density functional study of adenine tetrads with N6-H6...N3 hydrogen bonds.
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pubmed:affiliation |
Revotar Biopharmaceuticals AG, Neuendorfstrasse 24a, D-16761 Hennigsdorf, Germany. m.meyer@ revotar-ag.de
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pubmed:publicationType |
Journal Article
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