Source:http://linkedlifedata.com/resource/pubmed/id/18175699
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
Pt 1
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pubmed:dateCreated |
2008-1-7
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pubmed:databankReference | |
pubmed:abstractText |
A yellow-pigmented, Gram-negative, aerobic bacterial strain comprising rod-shaped cells devoid of flagellar and gliding motility, designated strain JC2129(T), was isolated from tidal flat sediment of Dongmak on Ganghwa Island, South Korea. Results from a 16S rRNA gene sequence analysis indicated that the isolate belonged to the family Flavobacteriaceae; the highest level of nucleotide sequence similarity (91.9%) occurred with Polaribacter dokdonensis DSW-5(T). The predominant cellular fatty acids were iso-C(15:0) (19.8%), iso-C(15:1) G (14.0%), iso-C(17:0) 3-OH (13.7%) and iso-C(13:0) (6.4%). Flexirubin-type pigments were absent. The major isoprenoid quinone was MK-6. The DNA G+C content was 43-45 mol%. Data from a polyphasic taxonomy study suggested that the isolate represents a novel genus and species in the family Flavobacteriaceae, for which the name Actibacter sediminis gen. nov., sp. nov. is proposed. The type strain of Actibacter sediminis is JC2129(T) (=KCTC 12704(T) =JCM 14002(T)).
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Jan
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pubmed:issn |
1466-5026
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
58
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
139-43
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pubmed:meshHeading |
pubmed-meshheading:18175699-Bacterial Typing Techniques,
pubmed-meshheading:18175699-Base Composition,
pubmed-meshheading:18175699-DNA, Bacterial,
pubmed-meshheading:18175699-Fatty Acids,
pubmed-meshheading:18175699-Flavobacteriaceae,
pubmed-meshheading:18175699-Genes, rRNA,
pubmed-meshheading:18175699-Geologic Sediments,
pubmed-meshheading:18175699-Molecular Sequence Data,
pubmed-meshheading:18175699-Phylogeny,
pubmed-meshheading:18175699-RNA, Ribosomal, 16S,
pubmed-meshheading:18175699-Seawater,
pubmed-meshheading:18175699-Sequence Analysis, DNA,
pubmed-meshheading:18175699-Species Specificity
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pubmed:year |
2008
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pubmed:articleTitle |
Actibacter sediminis gen. nov., sp. nov., a marine bacterium of the family Flavobacteriaceae isolated from tidal flat sediment.
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pubmed:affiliation |
Department of Biotechnology and BET Institute, Chung-Ang University, Anseong 456-756, Republic of Korea.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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