Linked Life Data

18025007

Source:http://linkedlifedata.com/resource/pubmed/id/18025007

Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
22
pubmed:dateCreated
2007-11-20
pubmed:abstractText
We report AtPRIMER, an application that automates the discovery of new polymorphic markers between ecotypes of Arabidopsis thaliana. On specifying two ecotypes and the genomic region of interest, the script retrieves all corresponding single nucleotide polymorphisms (SNPs) and generates CAPS and/or dCAPS PCR primer sequences. We show that AtPRIMER accurately found specific polymorphic markers for our linkage mapping project. AtPRIMER will therefore be useful for efficient marker development with high density and specificity.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Nov
pubmed:issn
1367-4811
pubmed:author
pubmed:issnType
Electronic
pubmed:day
15
pubmed:volume
23
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
3108-9
pubmed:dateRevised
2009-11-4
pubmed:meshHeading
pubmed:year
2007
pubmed:articleTitle
Marker development for the genetic study of natural variation in Arabidopsis thaliana.
pubmed:affiliation
Sainsbury Laboratory, Norwich NR4 7UH, UK. adnane.nemri@tsl.ac.uk
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't