Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
1
pubmed:dateCreated
2007-12-21
pubmed:abstractText
The blood-brain barrier (BBB) is composed of uniquely differentiated brain microvascular endothelial cells (BMEC). Often, it is of interest to replicate these attributes in the form of an in vitro model, and such models are widely used in the research community. However, the BMEC used to create in vitro BBB models de-differentiate in culture and lose many specialized characteristics. These changes are poorly understood at a molecular level, and little is known regarding the consequences of removing BMEC from their local in vivo microenvironment. To address these issues, suppression subtractive hybridization (SSH) was used to identify 25 gene transcripts that were differentially expressed between in vivo and in vitro BMEC. Genes affected included those involved in angiogenesis, transport and neurogenesis, and real-time quantitative polymerase chain reaction (qPCR) verified transcripts were primarily and significantly downregulated. Since this quantitative gene panel represented those BMEC characteristics lost upon culture, we used it to assess how culture manipulation, specifically BMEC purification and barrier induction by hydrocortisone, influenced the quality of in vitro models. Puromycin purification of BMEC elicited minimal differences compared with untreated BMEC, as assessed by qPCR. In contrast, qPCR-based gene panel analysis after induction with hydrocortisone indicated a modest shift of 10 of the 23 genes toward a more 'in vivo-like' gene expression profile, which correlated with improved barrier phenotype. Genomic analysis of BMEC de-differentiation in culture has thus yielded a functionally diverse set of genes useful for comparing the in vitro and in vivo BBB.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-10199811, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-10224231, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-10391242, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-10581191, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-11144350, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-11145224, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-11149669, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-11747814, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-11818362, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-11891429, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-12200960, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-12439289, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-12759411, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-12810672, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-12958437, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-1350574, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-14670994, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-14738488, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-15003827, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-15060285, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-15304623, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-15657052, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-15790664, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-15816851, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-15818740, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-15942647, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-16098142, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-16165110, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-16306934, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-16573646, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-1661734, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-1675906, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-16935746, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-2277354, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-2526655, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-6095085, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-6103738, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-7760177, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-8015384, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-8132678, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-8838658, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-9094723, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-9529372, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-9679029, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-9815277, http://linkedlifedata.com/resource/pubmed/commentcorrection/17565361-9850144
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jan
pubmed:issn
0271-678X
pubmed:author
pubmed:issnType
Print
pubmed:volume
28
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
135-48
pubmed:dateRevised
2010-12-3
pubmed:meshHeading
pubmed-meshheading:17565361-Animals, pubmed-meshheading:17565361-Anti-Inflammatory Agents, pubmed-meshheading:17565361-Biological Transport, pubmed-meshheading:17565361-Blood-Brain Barrier, pubmed-meshheading:17565361-Cell Dedifferentiation, pubmed-meshheading:17565361-Cell Separation, pubmed-meshheading:17565361-Cells, Cultured, pubmed-meshheading:17565361-Endothelial Cells, pubmed-meshheading:17565361-Gene Expression Profiling, pubmed-meshheading:17565361-Gene Expression Regulation, pubmed-meshheading:17565361-Genome, pubmed-meshheading:17565361-Hydrocortisone, pubmed-meshheading:17565361-Male, pubmed-meshheading:17565361-Models, Biological, pubmed-meshheading:17565361-Neovascularization, Physiologic, pubmed-meshheading:17565361-Protein Synthesis Inhibitors, pubmed-meshheading:17565361-Puromycin, pubmed-meshheading:17565361-Rats, pubmed-meshheading:17565361-Reverse Transcriptase Polymerase Chain Reaction
pubmed:year
2008
pubmed:articleTitle
A genomic comparison of in vivo and in vitro brain microvascular endothelial cells.
pubmed:affiliation
Department of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.
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