Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
5
pubmed:dateCreated
2006-2-22
pubmed:abstractText
Goodpasture syndrome is an autoimmune vascular disease associated with kidney and lung failure, with pathogenic circulating autoantibodies targeted to a set of discontinuous epitope sequences within the noncollagenous domain-1 (NC1) of the alpha3 chain of type IV collagen (alpha3(IV)NC1), the Goodpasture autoantigen. We demonstrate that basement membrane extracted NC1 domain preparations from Caenorhabditis elegans, Drosophila melanogaster, and Danio rerio do not bind Goodpasture autoantibodies, while Xenopus laevis, chicken, mouse and human alpha3(IV)NC1 domains bind autoantibodies. The alpha3(IV) chain is not present in C elegans and Drosophila melanogaster, but is first detected in the Danio rerio. Interestingly, native Danio rerio alpha3(IV)NC1 does not bind Goodpasture autoantibodies. Next, we cloned, sequenced, and generated recombinant Danio rerio alpha3(IV)NC1 domain. In contrast to recombinant human alpha3(IV)NC1 domain, there was complete absence of autoantibody binding to recombinant Danio rerio alpha3(IV)NC1. Three-dimensional molecular modeling from existing x-ray coordinates of human NC1 domain suggest that evolutionary alteration of electrostatic charge and polarity due to the emergence of critical serine, aspartic acid, and lysine residues, accompanied by the loss of asparagine and glutamine, contributes to the emergence of the 2 major Goodpasture epitopes on the human alpha3(IV)NC1 domain, as it evolved from the Danio rerio over 450 million years.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-10027952, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-10196215, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-10361879, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-10464328, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-10681598, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-10766752, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-10777566, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-10896942, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-10965041, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-11098057, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-11278365, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-11388816, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-11983906, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-12011424, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-12382326, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-12778132, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-12815141, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-12970356, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-14631560, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-14633133, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-15034074, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-15673304, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-15806477, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-16049074, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-16105036, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-1721062, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-2793871, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-3109906, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-7657706, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-7743665, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-7962065, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-8016138, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-8253711, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-8691734, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-8956999, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-8995737, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-9175266, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-9202017, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-9370260, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-9410904, http://linkedlifedata.com/resource/pubmed/commentcorrection/16254142-9550634
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
AIM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Mar
pubmed:issn
0006-4971
pubmed:author
pubmed:issnType
Print
pubmed:day
1
pubmed:volume
107
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1908-15
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2006
pubmed:articleTitle
Zebrafish to humans: evolution of the alpha3-chain of type IV collagen and emergence of the autoimmune epitopes associated with Goodpasture syndrome.
pubmed:affiliation
Center for Matrix Biology, Boston, MA, USA.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't, Research Support, N.I.H., Extramural