Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
2004-5-3
pubmed:abstractText
The non-random pattern of genome-wide DNA methylation in mammalian cells is established and maintained by DNA methyltransferases DNMT1, 3A, and 3B. De novo DNA methyltransferase DNMT3B is critical for embryonic development and is mutated in ICF syndrome. Despite its importance in normal cellular functioning, little is known about how DNMT3B operates in the context of chromatin. Here we demonstrate that DNMT3B associates with four chromatin-associated enzymatic activities common to transcriptionally repressed, heterochromatic regions of the genome: DNA methyltransferase, histone deacetylase, ATPase, and histone methylase activities. By immunoprecipitation and GST pull-down, we show that DNMT3B interacts with HDAC1, HDAC2, HP1 proteins, Suv39h1, and the ATP-dependent chromatin remodeling enzyme hSNF2H. Endogenous hSNF2H is also associated with DNA methyltransferase activity. These proteins co-localize extensively with DNMT3B in heterochromatic regions. Our results therefore link DNMT3B to three other components of the epigenetic machinery and provide important insights into how DNA methylation patterns may be established within the chromatin environment.
pubmed:grant
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Adenosine Triphosphatases, http://linkedlifedata.com/resource/pubmed/chemical/Adenosine Triphosphate, http://linkedlifedata.com/resource/pubmed/chemical/Chromatin, http://linkedlifedata.com/resource/pubmed/chemical/Chromosomal Proteins, Non-Histone, http://linkedlifedata.com/resource/pubmed/chemical/DNA (Cytosine-5-)-Methyltransferase, http://linkedlifedata.com/resource/pubmed/chemical/DNA methyltransferase 3B, http://linkedlifedata.com/resource/pubmed/chemical/HDAC1 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Hdac2 protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/Histone Deacetylase 1, http://linkedlifedata.com/resource/pubmed/chemical/Histone Deacetylase 2, http://linkedlifedata.com/resource/pubmed/chemical/Histone Deacetylases, http://linkedlifedata.com/resource/pubmed/chemical/Methyltransferases, http://linkedlifedata.com/resource/pubmed/chemical/Repressor Proteins, http://linkedlifedata.com/resource/pubmed/chemical/SMARCA5 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/SUV39H1 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Smarca5 protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/Suv39h1 protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/heterochromatin-specific...
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
0006-291X
pubmed:author
pubmed:issnType
Print
pubmed:day
28
pubmed:volume
318
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
544-55
pubmed:dateRevised
2010-5-21
pubmed:meshHeading
pubmed-meshheading:15120635-Adenosine Triphosphatases, pubmed-meshheading:15120635-Adenosine Triphosphate, pubmed-meshheading:15120635-Animals, pubmed-meshheading:15120635-Cell Line, pubmed-meshheading:15120635-Cell Nucleus, pubmed-meshheading:15120635-Chromatin, pubmed-meshheading:15120635-Chromosomal Instability, pubmed-meshheading:15120635-Chromosomal Proteins, Non-Histone, pubmed-meshheading:15120635-DNA (Cytosine-5-)-Methyltransferase, pubmed-meshheading:15120635-DNA Methylation, pubmed-meshheading:15120635-Gene Deletion, pubmed-meshheading:15120635-HeLa Cells, pubmed-meshheading:15120635-Histone Deacetylase 1, pubmed-meshheading:15120635-Histone Deacetylase 2, pubmed-meshheading:15120635-Histone Deacetylases, pubmed-meshheading:15120635-Humans, pubmed-meshheading:15120635-Methyltransferases, pubmed-meshheading:15120635-Mice, pubmed-meshheading:15120635-Precipitin Tests, pubmed-meshheading:15120635-Repressor Proteins, pubmed-meshheading:15120635-Syndrome
pubmed:year
2004
pubmed:articleTitle
DNMT3B interacts with hSNF2H chromatin remodeling enzyme, HDACs 1 and 2, and components of the histone methylation system.
pubmed:affiliation
Epigenetic Gene Regulation and Cancer Section, LRBGE/NCI/NIH, Bldg. 41, Rm. C306, 41 Library Dr., Bethesda, MD 20892, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S., Research Support, Non-U.S. Gov't