Source:http://linkedlifedata.com/resource/pubmed/id/15044098
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
4
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pubmed:dateCreated |
2004-3-26
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pubmed:abstractText |
The D-region connecting helices C and E of Vitreoscilla hemoglobin (VHb) appears disordered in the crystal structure. Six site-directed mutants in this region were made to investigate its possible functions. The mutant VHb's were analyzed using UV-visible and FTIR spectroscopy, using primarily the CO liganded forms, and their heme/protein ratios were determined. The results implicate Asp44, Arg47, and Glu49 as especially important in heme-globin interactions and ligand binding, and enabled construction of a model in which the D-region forms a loop that protrudes upward over the heme. Interactions between VHb (wild type and the D-region mutants) with the flavin domain of 2,4-DNT dioxygenase from Burkholderia were tested using bacterial two-hybrid screening. There was a correlation between the extent of the D-loop perturbation predicted for each mutant and the amount of the reduction in VHb-flavin domain interaction, suggesting that this region may be more generally involved in binding of VHb to flavoproteins.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/2,4-dinitrotoluene dioxygenase,
http://linkedlifedata.com/resource/pubmed/chemical/Bacterial Proteins,
http://linkedlifedata.com/resource/pubmed/chemical/Hemoglobins,
http://linkedlifedata.com/resource/pubmed/chemical/Oxygenases,
http://linkedlifedata.com/resource/pubmed/chemical/Truncated Hemoglobins,
http://linkedlifedata.com/resource/pubmed/chemical/hemoglobin protein, Vitreoscilla
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pubmed:status |
MEDLINE
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pubmed:month |
Apr
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pubmed:issn |
0006-291X
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
16
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pubmed:volume |
316
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
1101-6
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pubmed:dateRevised |
2007-11-15
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pubmed:meshHeading |
pubmed-meshheading:15044098-Amino Acid Substitution,
pubmed-meshheading:15044098-Bacterial Proteins,
pubmed-meshheading:15044098-Binding Sites,
pubmed-meshheading:15044098-Burkholderia,
pubmed-meshheading:15044098-Computer Simulation,
pubmed-meshheading:15044098-Hemoglobins,
pubmed-meshheading:15044098-Models, Molecular,
pubmed-meshheading:15044098-Mutagenesis, Site-Directed,
pubmed-meshheading:15044098-Oxygenases,
pubmed-meshheading:15044098-Protein Binding,
pubmed-meshheading:15044098-Protein Conformation,
pubmed-meshheading:15044098-Protein Structure, Tertiary,
pubmed-meshheading:15044098-Spectroscopy, Fourier Transform Infrared,
pubmed-meshheading:15044098-Structure-Activity Relationship,
pubmed-meshheading:15044098-Truncated Hemoglobins
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pubmed:year |
2004
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pubmed:articleTitle |
Structure-function studies of the Vitreoscilla hemoglobin D-region.
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pubmed:affiliation |
Biology Division, Department of Biological, Chemical, and Physical Sciences, Illinois Institute of Technology, Chicago, IL 60616, USA.
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, Non-P.H.S.,
Evaluation Studies,
Validation Studies
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