Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:dateCreated
2003-12-8
pubmed:abstractText
The exact mechanisms by which enhancers regulate transcription are currently under investigation. For some genes, activation is accomplished by an intricate array of enhancer cis-regulatory elements that direct the assembly of a gene-specific activation complex known as an "enhanceosome". Transcription of the fibroblast growth factor-4 (FGF-4) gene during early development is controlled by a powerful distal enhancer located 3 kb downstream of the transcription start site within the 3' untranslated region of the gene. Previous studies have shown that FGF-4 enhancer function is mediated by at least three critical positive cis-regulatory elements: an HMG, a POU, and a GT-box motif, which bind the transcription factors Sox-2, Oct-3, and Sp1/Sp3, respectively. In this study, we identify a second essential HMG motif within the FGF-4 enhancer that binds the transcription factor Sox-2. Moreover, we demonstrate that spatial alignment of the new HMG motif, relative the other enhancer cis-regulatory elements, is important. Based on findings presented in this report, and work published earlier, we propose that the previously identified core HMG and POU cis-regulatory elements of the FGF-4 enhancer are dependent on one another and function in an enhanceosome-like manner. In contrast, the HMG motif identified in this study is only partially dependent on the other enhancer cis-regulatory elements for its function.
pubmed:grant
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Cell Extracts, http://linkedlifedata.com/resource/pubmed/chemical/Chloramphenicol O-Acetyltransferase, http://linkedlifedata.com/resource/pubmed/chemical/DNA-Binding Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Fibroblast Growth Factor 4, http://linkedlifedata.com/resource/pubmed/chemical/Fibroblast Growth Factors, http://linkedlifedata.com/resource/pubmed/chemical/HMGB Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Nuclear Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Oligonucleotide Probes, http://linkedlifedata.com/resource/pubmed/chemical/Proto-Oncogene Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Recombinant Fusion Proteins, http://linkedlifedata.com/resource/pubmed/chemical/SOXB1 Transcription Factors, http://linkedlifedata.com/resource/pubmed/chemical/Transcription Factors
pubmed:status
MEDLINE
pubmed:month
Dec
pubmed:issn
0378-1119
pubmed:author
pubmed:issnType
Print
pubmed:day
24
pubmed:volume
323
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
163-72
pubmed:dateRevised
2008-11-21
pubmed:meshHeading
pubmed-meshheading:14659890-Animals, pubmed-meshheading:14659890-Base Sequence, pubmed-meshheading:14659890-Binding Sites, pubmed-meshheading:14659890-Cell Extracts, pubmed-meshheading:14659890-Cell Line, Tumor, pubmed-meshheading:14659890-Chloramphenicol O-Acetyltransferase, pubmed-meshheading:14659890-DNA-Binding Proteins, pubmed-meshheading:14659890-Electrophoretic Mobility Shift Assay, pubmed-meshheading:14659890-Enhancer Elements, Genetic, pubmed-meshheading:14659890-Fibroblast Growth Factor 4, pubmed-meshheading:14659890-Fibroblast Growth Factors, pubmed-meshheading:14659890-Gene Expression Regulation, pubmed-meshheading:14659890-HMG-Box Domains, pubmed-meshheading:14659890-HMGB Proteins, pubmed-meshheading:14659890-Nuclear Proteins, pubmed-meshheading:14659890-Oligonucleotide Probes, pubmed-meshheading:14659890-Plasmids, pubmed-meshheading:14659890-Protein Binding, pubmed-meshheading:14659890-Proto-Oncogene Proteins, pubmed-meshheading:14659890-Recombinant Fusion Proteins, pubmed-meshheading:14659890-SOXB1 Transcription Factors, pubmed-meshheading:14659890-Transcription Factors, pubmed-meshheading:14659890-Transfection
pubmed:year
2003
pubmed:articleTitle
Regulation of the FGF-4 gene by a complex distal enhancer that functions in part as an enhanceosome.
pubmed:affiliation
Eppley Institute for the Research in Cancer and Allied Diseases, Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE 68198-6805, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S., Research Support, Non-U.S. Gov't