Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
2003-5-2
pubmed:databankReference
pubmed:abstractText
This paper reports the complete nucleotide sequence of the 3.85 kbp plasmid pBM02 from Lactococcus lactis subsp. cremoris P8-2-47. Analysis of the sequence predicted six ORFs larger than 25 amino acids. They all were transcribed from the same strand and organized in two functional cassettes: the replication region and a putative mobilization region. In the replication region, two ORFs specifying proteins homologous to others found in some classes of rolling circle-replicating plasmids were encountered (copG and repB). In fact, single-stranded DNA was detected as a replication intermediate of pBM02. copG and repB, together with some upstream sequences, formed part of the minimal replication unit of the plasmid. Interestingly, pBM02 shared a 212 bp stretch with plasmids of the pWV01 type, in which the whole single-strand origin of replication is included. In the mobilization region, an ORF coding for a mobilization-like protein was present, preceded by a putative oriT sequence homologous to that of plasmid pMV158. The replicon of pBM02 is of the wide-host range type, and functions in both Gram-positive and Gram-negative bacteria, including Lactobacillus casei, Lactobacillus plantarum, Bacillus subtilis, and Escherichia coli.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Mar
pubmed:issn
0147-619X
pubmed:author
pubmed:issnType
Print
pubmed:volume
49
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
118-29
pubmed:dateRevised
2006-11-15
pubmed:meshHeading
pubmed-meshheading:12726765-Amino Acid Sequence, pubmed-meshheading:12726765-Base Sequence, pubmed-meshheading:12726765-Cloning, Molecular, pubmed-meshheading:12726765-DNA, pubmed-meshheading:12726765-DNA Helicases, pubmed-meshheading:12726765-DNA Replication, pubmed-meshheading:12726765-DNA-Binding Proteins, pubmed-meshheading:12726765-Escherichia coli Proteins, pubmed-meshheading:12726765-In Situ Hybridization, pubmed-meshheading:12726765-Lactococcus lactis, pubmed-meshheading:12726765-Molecular Sequence Data, pubmed-meshheading:12726765-Open Reading Frames, pubmed-meshheading:12726765-Phylogeny, pubmed-meshheading:12726765-Plasmids, pubmed-meshheading:12726765-Proteins, pubmed-meshheading:12726765-Replication Origin, pubmed-meshheading:12726765-Sequence Analysis, pubmed-meshheading:12726765-Sequence Homology, Amino Acid, pubmed-meshheading:12726765-Trans-Activators, pubmed-meshheading:12726765-Untranslated Regions
pubmed:year
2003
pubmed:articleTitle
Sequence and analysis of pBM02, a novel RCR cryptic plasmid from Lactococcus lactis subsp cremoris P8-2-47.
pubmed:affiliation
Instituto de Productos Lácteos de Asturias (CSIC), Carretera de Infiesto s/n, 33300-Villaviciosa, Asturias, Spain.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't