Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
8
pubmed:dateCreated
2002-9-5
pubmed:abstractText
Slu7 and Prp18 act in concert during the second step of yeast pre-mRNA splicing. Here we show that the 382-amino-acid Slu7 protein contains two functionally important domains: a zinc knuckle (122CRNCGEAGHKEKDC135) and a Prp18-interaction domain (215EIELMKLELY224). Alanine cluster mutations of 215EIE217 and 221LELY224 abrogated Slu7 binding to Prp18 in a two-hybrid assay and in vitro, and elicited temperature-sensitive growth phenotypes in vivo. Yet, the mutations had no impact on Slu7 function in pre-mRNA splicing in vitro. Single alanine mutations of zinc knuckle residues Cys122, His130, and Cys135 had no effect on cell growth, but caused Slu7 function during pre-mRNA splicing in vitro to become dependent on Prp18. Specifically, zinc knuckle mutants required Prp18 in order to bind to the spliceosome. Compound mutations in both Slu7 domains (e.g., C122A-EIE, H130A-EIE, and C135A-EIE) were lethal in vivo and abolished splicing in vitro, suggesting that the physical interaction between Slu7 and Prp18 is important for cooperation in splicing. Depletion/reconstitution studies coupled with immunoprecipitations suggest that second step factors are recruited to the spliceosome in the following order: Slu7 --> Prp18 --> Prp22. All three proteins are released from the spliceosome after step 2 concomitant with release of mature mRNA.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-10094314, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-10197984, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-10926523, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-10931913, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-11102353, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-11290703, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-11691992, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-11804584, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-11856747, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-11886864, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-1406691, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-1427075, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-1464325, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-1825134, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-3017708, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-3903513, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-7534458, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-7535718, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-7568198, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-7664739, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-8013463, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-8156990, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-8436300, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-8474454, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-8548652, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-8752089, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-8756413, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-9153314, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-9312037, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-9476892, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-9524130, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-9582097, http://linkedlifedata.com/resource/pubmed/commentcorrection/12212850-9582286
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/DEAD-box RNA Helicases, http://linkedlifedata.com/resource/pubmed/chemical/Fungal Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Nuclear Proteins, http://linkedlifedata.com/resource/pubmed/chemical/PRP18 protein, S cerevisiae, http://linkedlifedata.com/resource/pubmed/chemical/PRP22 protein, S cerevisiae, http://linkedlifedata.com/resource/pubmed/chemical/RNA, Fungal, http://linkedlifedata.com/resource/pubmed/chemical/RNA Helicases, http://linkedlifedata.com/resource/pubmed/chemical/RNA Precursors, http://linkedlifedata.com/resource/pubmed/chemical/RNA-Binding Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Ribonucleoprotein, U5 Small Nuclear, http://linkedlifedata.com/resource/pubmed/chemical/Ribonucleoproteins, Small Nuclear, http://linkedlifedata.com/resource/pubmed/chemical/SLU7 protein, S cerevisiae, http://linkedlifedata.com/resource/pubmed/chemical/Saccharomyces cerevisiae Proteins
pubmed:status
MEDLINE
pubmed:month
Aug
pubmed:issn
1355-8382
pubmed:author
pubmed:issnType
Print
pubmed:volume
8
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1068-77
pubmed:dateRevised
2009-11-19
pubmed:meshHeading
pubmed-meshheading:12212850-Amino Acid Motifs, pubmed-meshheading:12212850-Amino Acid Sequence, pubmed-meshheading:12212850-Binding Sites, pubmed-meshheading:12212850-DEAD-box RNA Helicases, pubmed-meshheading:12212850-Fungal Proteins, pubmed-meshheading:12212850-Genes, Fungal, pubmed-meshheading:12212850-Models, Biological, pubmed-meshheading:12212850-Molecular Sequence Data, pubmed-meshheading:12212850-Mutagenesis, Site-Directed, pubmed-meshheading:12212850-Mutation, pubmed-meshheading:12212850-Nuclear Proteins, pubmed-meshheading:12212850-Protein Structure, Tertiary, pubmed-meshheading:12212850-RNA, Fungal, pubmed-meshheading:12212850-RNA Helicases, pubmed-meshheading:12212850-RNA Precursors, pubmed-meshheading:12212850-RNA Splicing, pubmed-meshheading:12212850-RNA-Binding Proteins, pubmed-meshheading:12212850-Ribonucleoprotein, U5 Small Nuclear, pubmed-meshheading:12212850-Ribonucleoproteins, Small Nuclear, pubmed-meshheading:12212850-Saccharomyces cerevisiae, pubmed-meshheading:12212850-Saccharomyces cerevisiae Proteins, pubmed-meshheading:12212850-Sequence Deletion, pubmed-meshheading:12212850-Spliceosomes
pubmed:year
2002
pubmed:articleTitle
How Slu7 and Prp18 cooperate in the second step of yeast pre-mRNA splicing.
pubmed:affiliation
Department of Microbiology and Immunology, Weill Medical College of Cornell University, New York, New York 10021, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S.