Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
8
pubmed:dateCreated
2001-7-25
pubmed:databankReference
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247113, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247114, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247115, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247116, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247117, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247118, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247119, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247120, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247121, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247122, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247123, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247124, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247125, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247126, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247127, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/AF247128
pubmed:abstractText
Spectral tuning of visual pigments is typically accomplished through changes in opsin amino acid sequence. Within a given opsin class, changes at a few key sites control wavelength specificity. To investigate known differences in the visual pigment spectral sensitivity of the Lake Malawi cichlids, Metriaclima zebra (368, 488, and 533 nm) and Dimidiochromis compressiceps (447, 536, and 569 nm), we sequenced cone opsin genes from these species as well as Labeotropheus fuelleborni and Oreochromis niloticus. These cichlids have five distinct classes of cone opsin genes, including two unique SWS-2 genes. Comparisons of the inferred amino acid sequences from the five cone opsin genes of M. zebra, D. compressiceps, and L. fuelleborni show the sequences to be nearly identical. Therefore, evolution of key opsin sites cannot explain the differences in visual pigment sensitivities. Real-time PCR demonstrates that different cichlid species express different subsets of the available cone opsin genes. Metriaclima zebra and L. fuelleborni express a complement of genes which give them UV-shifted visual pigments, while D. compressiceps expresses a different set to produce a red-shifted visual system. Thus, variations in cichlid spectral sensitivity have arisen through evolution of gene regulation, rather than through changes in opsin amino acid sequence.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Aug
pubmed:issn
0737-4038
pubmed:author
pubmed:issnType
Print
pubmed:volume
18
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1540-50
pubmed:dateRevised
2008-11-21
pubmed:meshHeading
pubmed:year
2001
pubmed:articleTitle
Cone opsin genes of african cichlid fishes: tuning spectral sensitivity by differential gene expression.
pubmed:affiliation
Department of Zoology. Program in Genetics, University of New Hampshire, Durham 03824, USA. karen.carleton@unh.edu
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, Non-P.H.S., Research Support, Non-U.S. Gov't