Source:http://linkedlifedata.com/resource/pubmed/id/11164886
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
3
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pubmed:dateCreated |
2001-2-22
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pubmed:abstractText |
To develop tools for analysis of the acute phase response, we used suppression subtractive hybridization of cDNAs from the livers of trout in an unchallenged state and in the course of a response to injection with a Vibrio bacterin emulsified in Freund's Incomplete Adjuvant. The resulting cDNA library contains 300-600bp long fragments of 25 or more immune-relevant genes. Fifteen were previously unreported for salmonids, and 12 were not known from any fish species. Known acute phase proteins include serum amyloid A, transferrin and precerebellin-like protein; trout C-polysaccharide-binding protein 1 is probably also an acute phase protein. Components of both the complement system (n=5) and the clotting system (n=3), as well as lectins, various binding proteins, a putative antibacterial peptide, a chemotaxin, an anti-oxidant enzyme, as well as some likely cell-surface receptors and metabolic and lysosomal enzymes are represented in the library. One clone closely resembles a group of Toll-like receptors, including the human IL-1 receptor. Three cDNAs appear to represent complete open reading frames.
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pubmed:grant | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Apr
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pubmed:issn |
0145-305X
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
25
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
205-17
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pubmed:dateRevised |
2007-11-14
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pubmed:meshHeading |
pubmed-meshheading:11164886-Acute-Phase Proteins,
pubmed-meshheading:11164886-Amino Acid Sequence,
pubmed-meshheading:11164886-Animals,
pubmed-meshheading:11164886-Base Sequence,
pubmed-meshheading:11164886-Chemotactic Factors,
pubmed-meshheading:11164886-Cloning, Molecular,
pubmed-meshheading:11164886-Consensus Sequence,
pubmed-meshheading:11164886-DNA, Complementary,
pubmed-meshheading:11164886-Liver,
pubmed-meshheading:11164886-Molecular Sequence Data,
pubmed-meshheading:11164886-Nucleic Acid Hybridization,
pubmed-meshheading:11164886-Oncorhynchus mykiss,
pubmed-meshheading:11164886-Sequence Homology, Amino Acid
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pubmed:year |
2001
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pubmed:articleTitle |
Immune-relevant (including acute phase) genes identified in the livers of rainbow trout, Oncorhynchus mykiss, by means of suppression subtractive hybridization.
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pubmed:affiliation |
Laboratory of Marine Biological Chemistry, Division of Bioresource and Bioenvironmental Sciences, Graduate School, Kyushu University, Hakozaki, Fukuoka 812-8581, Japan. baynec@bcc.orst.edu
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, P.H.S.
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