Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
13
pubmed:dateCreated
2000-8-15
pubmed:databankReference
pubmed:abstractText
The functional complementation of two Escherichia coli strains defective in the succinylase pathway of meso-diaminopimelate (meso-DAP) biosynthesis with a Bordetella pertussis gene library resulted in the isolation of a putative dap operon containing three open reading frames (ORFs). In line with the successful complementation of the E. coli dapD and dapE mutants, the deduced amino acid sequences of two ORFs revealed significant sequence similarities with the DapD and DapE proteins of E. coli and many other bacteria which exhibit tetrahydrodipicolinate succinylase and N-succinyl-L,L-DAP desuccinylase activity, respectively. The first ORF within the operon showed significant sequence similarities with transaminases and contains the characteristic pyridoxal-5'-phosphate binding motif. Enzymatic studies revealed that this ORF encodes a protein with N-succinyl-L,L-DAP aminotransferase activity converting N-succinyl-2-amino-6-ketopimelate, the product of the succinylase DapD, to N-succinyl-L,L-DAP, the substrate of the desuccinylase DapE. Therefore, this gene appears to encode the DapC protein of B. pertussis. Apart from the pyridoxal-5'-phosphate binding motif, the DapC protein does not show further amino acid sequence similarities with the only other known enzyme with N-succinyl-L,L-DAP aminotransferase activity, ArgD of E. coli.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-10074354, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-1259145, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-13734750, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-13756049, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-15403106, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-1644752, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-1906065, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-1990006, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-2162051, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-2543636, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-2659521, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-4291280, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-4926684, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-5411754, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-6094577, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-6546423, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-6630358, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-7476167, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-7542800, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-8170389, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-8407844, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-8590279, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-8755871, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-8760912, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-8885833, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-9098082, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-9252185, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-9317022, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-9521647, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-9559056, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-9620966, http://linkedlifedata.com/resource/pubmed/commentcorrection/10850974-9729611
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jul
pubmed:issn
0021-9193
pubmed:author
pubmed:issnType
Print
pubmed:volume
182
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
3626-31
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2000
pubmed:articleTitle
Characterization of a bordetella pertussis diaminopimelate (DAP) biosynthesis locus identifies dapC, a novel gene coding for an N-succinyl-L,L-DAP aminotransferase.
pubmed:affiliation
Theodor-Boveri-Institut für Biowissenschaften, Lehrstuhl für Mikrobiologie, Universität Würzburg, D-97074 Würzburg, Germany. tmf@creatogen.de
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't