rdf:type |
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lifeskim:mentions |
umls-concept:C0012935,
umls-concept:C0040715,
umls-concept:C0242485,
umls-concept:C0456389,
umls-concept:C0599718,
umls-concept:C0599813,
umls-concept:C0599893,
umls-concept:C0678536,
umls-concept:C0920283,
umls-concept:C1261552,
umls-concept:C1522702
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pubmed:issue |
1
|
pubmed:dateCreated |
2000-1-28
|
pubmed:abstractText |
Using a fluorescent sensor for inorganic phosphate, the kinetics of ATP hydrolysis by PcrA helicase were measured in the presence of saturating concentrations of oligonucleotides of various lengths. There is a rapid phase of inorganic phosphate release that is equivalent to several turnovers of the ATPase, followed by slower steady-state ATP hydrolysis. The magnitude of the rapid phase is governed by the length of single-stranded DNA, while the slow phase is independent of its length. A kinetic model is presented in which the rapid phase is associated with translocation along single-stranded DNA, after the PcrA binds randomly along the DNA. There is a linear relationship between the length of single-stranded DNA and both the duration and amplitude of the rapid phase. These data suggest that the translocation activity occurs at 50 bases/s in unidirectional single-base steps, each requiring the hydrolysis of 1 ATP molecule.
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pubmed:language |
eng
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pubmed:journal |
|
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Adenosine Triphosphatases,
http://linkedlifedata.com/resource/pubmed/chemical/Adenosine Triphosphate,
http://linkedlifedata.com/resource/pubmed/chemical/Bacterial Proteins,
http://linkedlifedata.com/resource/pubmed/chemical/DNA, Single-Stranded,
http://linkedlifedata.com/resource/pubmed/chemical/DNA Helicases,
http://linkedlifedata.com/resource/pubmed/chemical/Oligonucleotides,
http://linkedlifedata.com/resource/pubmed/chemical/Phosphates,
http://linkedlifedata.com/resource/pubmed/chemical/Poly T,
http://linkedlifedata.com/resource/pubmed/chemical/PrcA protein, bacteria,
http://linkedlifedata.com/resource/pubmed/chemical/Subtilisins
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pubmed:status |
MEDLINE
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pubmed:month |
Jan
|
pubmed:issn |
0006-2960
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pubmed:author |
|
pubmed:issnType |
Print
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pubmed:day |
11
|
pubmed:volume |
39
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pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
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pubmed:pagination |
205-12
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pubmed:dateRevised |
2009-11-19
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pubmed:meshHeading |
pubmed-meshheading:10625495-Adenosine Triphosphatases,
pubmed-meshheading:10625495-Adenosine Triphosphate,
pubmed-meshheading:10625495-Bacterial Proteins,
pubmed-meshheading:10625495-Base Composition,
pubmed-meshheading:10625495-Base Sequence,
pubmed-meshheading:10625495-Biological Transport,
pubmed-meshheading:10625495-DNA, Single-Stranded,
pubmed-meshheading:10625495-DNA Helicases,
pubmed-meshheading:10625495-Geobacillus stearothermophilus,
pubmed-meshheading:10625495-Kinetics,
pubmed-meshheading:10625495-Oligonucleotides,
pubmed-meshheading:10625495-Phosphates,
pubmed-meshheading:10625495-Poly T,
pubmed-meshheading:10625495-Subtilisins
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pubmed:year |
2000
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pubmed:articleTitle |
Demonstration of unidirectional single-stranded DNA translocation by PcrA helicase: measurement of step size and translocation speed.
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pubmed:affiliation |
Sir William Dunn School of Pathology, University of Oxford, United Kingdom.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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