Source:http://linkedlifedata.com/resource/pubmed/id/10493856
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
1
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pubmed:dateCreated |
1999-10-20
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pubmed:abstractText |
Cleavage by the endoribonuclease RNase P requires the presence of divalent metal ions, of which Mg2+ promotes most efficient cleavage. Here we have studied the importance of there being Mg2+ in RNase P RNA catalysis. It is demonstrated that addition of Mn2+ resulted in a shift of the cleavage site and that this shift was associated with a change in the kinetic constants, in particular kcat. Our data further suggest that the influence of Mn2+ on cleavage site recognition depends on the -1/+73 base-pair in the substrate and the +73/294 base-pair in the RNase P RNA-substrate (RS)-complex. Based on our data we suggest that cleavage in the presence of Mg2+ as the only divalent metal ion proceeds through an intermediate which involves the establishment of the +73/294 base-pair in the RS-complex. By contrast, addition of Mn2+ favours an alternative pathway which results in a shift of the cleavage site. We also studied the influence of Mn2+ on cleavage site recognition and the kinetics of cleavage using various RNase P RNA derivatives carrying substitutions in the region of RNase P RNA that base-pair with the 3' terminal end of the substrate. From these results we conclude that a change in the structure of this RNase P RNA domain influences the involvement of a divalent metal ion(s) in the chemistry of cleavage.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Endoribonucleases,
http://linkedlifedata.com/resource/pubmed/chemical/Escherichia coli Proteins,
http://linkedlifedata.com/resource/pubmed/chemical/Lead,
http://linkedlifedata.com/resource/pubmed/chemical/Magnesium,
http://linkedlifedata.com/resource/pubmed/chemical/Manganese,
http://linkedlifedata.com/resource/pubmed/chemical/RNA,
http://linkedlifedata.com/resource/pubmed/chemical/RNA, Bacterial,
http://linkedlifedata.com/resource/pubmed/chemical/RNA, Catalytic,
http://linkedlifedata.com/resource/pubmed/chemical/Ribonuclease P,
http://linkedlifedata.com/resource/pubmed/chemical/ribonuclease P, E coli
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pubmed:status |
MEDLINE
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pubmed:month |
Sep
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pubmed:issn |
0022-2836
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pubmed:author | |
pubmed:copyrightInfo |
Copyright 1999 Academic Press.
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pubmed:issnType |
Print
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pubmed:day |
10
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pubmed:volume |
292
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
53-63
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:10493856-Base Pairing,
pubmed-meshheading:10493856-Base Sequence,
pubmed-meshheading:10493856-Endoribonucleases,
pubmed-meshheading:10493856-Escherichia coli,
pubmed-meshheading:10493856-Escherichia coli Proteins,
pubmed-meshheading:10493856-Kinetics,
pubmed-meshheading:10493856-Lead,
pubmed-meshheading:10493856-Magnesium,
pubmed-meshheading:10493856-Manganese,
pubmed-meshheading:10493856-Molecular Sequence Data,
pubmed-meshheading:10493856-Nucleic Acid Conformation,
pubmed-meshheading:10493856-RNA,
pubmed-meshheading:10493856-RNA, Bacterial,
pubmed-meshheading:10493856-RNA, Catalytic,
pubmed-meshheading:10493856-Ribonuclease P
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pubmed:year |
1999
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pubmed:articleTitle |
Manganese ions induce miscleavage in the Escherichia coli RNase P RNA-catalyzed reaction.
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pubmed:affiliation |
Department of Cell and Molecular Biology, Uppsala University, Uppsala, SE-751 24, Sweden.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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