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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
9
pubmed:dateCreated
1999-6-28
pubmed:abstractText
Two members of the pgip gene family (pgip-1 and pgip-2) of Phaseolus vulgaris L. were expressed separately in Nicotiana benthamiana and the ligand specificity of their products was analysed by surface plasmon resonance (SPR). Polygalacturonase-inhibiting protein-1 (PGIP-1) was unable to interact with PG from Fusarium moniliforme and interacted with PG from Aspergillus niger; PGIP-2 interacted with both PGs. Only eight amino acid variations distinguish the two proteins: five of them are confined within the beta-sheet/beta-turn structure and two of them are contiguous to this region. By site-directed mutagenesis, each of the variant amino acids of PGIP-2 was replaced with the corresponding amino acid of PGIP-1, in a loss-of-function approach. The mutated PGIP-2s were expressed individually in N.benthamiana, purified and subjected to SPR analysis. Each single mutation caused a decrease in affinity for PG from F.moniliforme; residue Q253 made a major contribution, and its replacement with a lysine led to a dramatic reduction in the binding energy of the complex. Conversely, in a gain-of-function approach, amino acid K253 of PGIP-1 was mutated into the corresponding amino acid of PGIP-2, a glutamine. With this single mutation, PGIP-1 acquired the ability to interact with F.moniliforme PG.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-1303801, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-1368480, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-16665751, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-16666805, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-17810339, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-2331322, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-7599646, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-7638602, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-7765794, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-7817399, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-7877692, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-7923358, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-8061315, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-8091210, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-8108494, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-8264799, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-8377825, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-8624444, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-8776736, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-8810077, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-8969533, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9000628, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9027343, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9029940, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9144966, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9160749, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9218483, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9291971, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9298904, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9304859, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9311977, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9413991, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9437864, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9533877, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9637069, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9724691, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9811791, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9811792, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9811793, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9811794, http://linkedlifedata.com/resource/pubmed/commentcorrection/10228150-9811798
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
0261-4189
pubmed:author
pubmed:issnType
Print
pubmed:day
4
pubmed:volume
18
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2352-63
pubmed:dateRevised
2010-9-10
pubmed:meshHeading
pubmed-meshheading:10228150-Amino Acid Sequence, pubmed-meshheading:10228150-Base Sequence, pubmed-meshheading:10228150-DNA, Complementary, pubmed-meshheading:10228150-Fabaceae, pubmed-meshheading:10228150-Fusarium, pubmed-meshheading:10228150-Gene Library, pubmed-meshheading:10228150-Models, Molecular, pubmed-meshheading:10228150-Molecular Sequence Data, pubmed-meshheading:10228150-Mutagenesis, Site-Directed, pubmed-meshheading:10228150-Plant Proteins, pubmed-meshheading:10228150-Plants, Medicinal, pubmed-meshheading:10228150-Plants, Toxic, pubmed-meshheading:10228150-Polygalacturonase, pubmed-meshheading:10228150-Protein Structure, Secondary, pubmed-meshheading:10228150-Recombinant Proteins, pubmed-meshheading:10228150-Repetitive Sequences, Amino Acid, pubmed-meshheading:10228150-Sequence Analysis, DNA, pubmed-meshheading:10228150-Sequence Homology, Amino Acid, pubmed-meshheading:10228150-Tobacco
pubmed:year
1999
pubmed:articleTitle
The specificity of polygalacturonase-inhibiting protein (PGIP): a single amino acid substitution in the solvent-exposed beta-strand/beta-turn region of the leucine-rich repeats (LRRs) confers a new recognition capability.
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