Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
1999-3-9
pubmed:abstractText
We are exploring the ability of genetically engineered versions of the Staphylococcus aureus alpha-hemolysin (alphaHL) ion channel to serve as rationally designed sensor components for analytes including divalent cations. We show here that neither the hemolytic activity nor the single channel current of wild-type alphaHL was affected by [Zn(II)] </= 1 mM. Binding sites for the divalent cations were formed by altering the number and location of coordinating side chains, e.g., histidines and aspartic acids, between positions 126 and 134, inclusive. Several mutant alphaHLs exhibited Zn(II)-induced current noise that varied with Zn(II) concentration. At a fixed divalent cation concentration, the current fluctuation kinetics depended on the analyte type, e.g., Zn(II), Cu(II), Ni(II), and Co(II). We also show that the ability of Zn(II) to change the mutant channel current suggests that the pore's topology is beta-sheet and that position 130 is near the turn at the trans mouth. Both conclusions are consistent with the crystal structure of WT-alphaHL oligomerized in detergent. Our results, in the context of the channel's crystal structure, suggest that conductance blockades were caused by Zn(II) binding to the outside surface of the pore. Thus, analyte-induced current blockades alone might not establish whether an analyte binding site is inside a pore.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-1321496, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-1384130, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-1384601, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-1587866, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-1648261, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-2160734, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-2314235, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-2425095, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-2442620, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-2453804, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-2560193, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-339102, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-3881765, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-4509315, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-5765058, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-6411618, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-6500704, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-7522344, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-7545444, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-7547996, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-7809129, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-8073035, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-8505320, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-8555220, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-8558589, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-8598930, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-8617232, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-8923262, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-8943010, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-8943190, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-9075647, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-9177344, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-9263637, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-9326657, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-9404007, http://linkedlifedata.com/resource/pubmed/commentcorrection/9929485-9543005
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Feb
pubmed:issn
0006-3495
pubmed:author
pubmed:issnType
Print
pubmed:volume
76
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
837-45
pubmed:dateRevised
2010-9-13
pubmed:meshHeading
pubmed:year
1999
pubmed:articleTitle
Genetically engineered metal ion binding sites on the outside of a Channel's transmembrane beta-barrel.
pubmed:affiliation
National Institute of Standards and Technology, Biotechnology Division, Gaithersburg, Maryland 20899, USA. john.kasianowicz@nist.gov
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, Non-P.H.S., Research Support, Non-U.S. Gov't