Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
11
pubmed:dateCreated
1999-2-2
pubmed:abstractText
PapD is the prototype member of a family of periplasmic chaperones which are required for assembly of virulence associated pili in pathogenic, gram-negative bacteria. In the present investigation, an ELISA has been developed for evaluation of compounds as inhibitors of PapD. Synthetic peptides, including an octamer, derived from the C-terminus of the pilus adhesin PapG were able to inhibit PapD in the ELISA. Evaluation of a panel of octapeptides in the ELISA, in combination with NMR studies, showed that the peptides were bound as extended beta-strands by PapD in aqueous solution. The PapD-peptide complex was stabilized by backbone to backbone hydrogen bonds and interactions involving three hydrophobic peptide side chains. This structural information, together with previous crystal structure data, provides a starting point in efforts to design and synthesize compounds which bind to chaperones and interfere with pilus assembly in pathogenic bacteria.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Nov
pubmed:issn
0968-0896
pubmed:author
pubmed:issnType
Print
pubmed:volume
6
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2085-101
pubmed:dateRevised
2006-11-15
pubmed:meshHeading
pubmed-meshheading:9881099-Amino Acid Sequence, pubmed-meshheading:9881099-Bacterial Proteins, pubmed-meshheading:9881099-Binding Sites, pubmed-meshheading:9881099-Enzyme-Linked Immunosorbent Assay, pubmed-meshheading:9881099-Escherichia coli, pubmed-meshheading:9881099-Escherichia coli Proteins, pubmed-meshheading:9881099-Indicators and Reagents, pubmed-meshheading:9881099-Kinetics, pubmed-meshheading:9881099-Molecular Chaperones, pubmed-meshheading:9881099-Molecular Sequence Data, pubmed-meshheading:9881099-Nuclear Magnetic Resonance, Biomolecular, pubmed-meshheading:9881099-Oligopeptides, pubmed-meshheading:9881099-Peptide Fragments, pubmed-meshheading:9881099-Periplasmic Proteins, pubmed-meshheading:9881099-Protein Structure, Secondary, pubmed-meshheading:9881099-Solutions, pubmed-meshheading:9881099-Structure-Activity Relationship
pubmed:year
1998
pubmed:articleTitle
Binding of peptides in solution by the Escherichia coli chaperone PapD as revealed using an inhibition ELISA and NMR spectroscopy.
pubmed:affiliation
Center for Chemistry and Chemical Engineering, Lund University, Sweden.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't