Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
12
pubmed:dateCreated
1998-12-23
pubmed:databankReference
pubmed:abstractText
Guanine nucleotide exchange factors in the Dbl family activate Rho GTPases by accelerating dissociation of bound GDP, promoting acquisition of the GTP-bound state. Dbl proteins possess a approximately 200 residue catalytic Dbl-homology (DH) domain, that is arranged in tandem with a C-terminal pleckstrin homology (PH) domain in nearly all cases. Here we report the solution structure of the DH domain of human PAK-interacting exchange protein (betaPIX). The domain is composed of 11 alpha-helices that form a flattened, elongated bundle. The structure explains a large body of mutagenesis data, which, along with sequence comparisons, identify the GTPase interaction site as a surface formed by three conserved helices near the center of one face of the domain. Proximity of the site to the DH C-terminus suggests a means by which PH-ligand interactions may be coupled to DH-GTPase interactions to regulate signaling through the Dbl proteins in vivo.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Blood Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Caenorhabditis elegans Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Cell Cycle Proteins, http://linkedlifedata.com/resource/pubmed/chemical/FGD1 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/GTP Phosphohydrolases, http://linkedlifedata.com/resource/pubmed/chemical/GTP-Binding Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Guanine Nucleotide Exchange Factors, http://linkedlifedata.com/resource/pubmed/chemical/Guanosine Diphosphate, http://linkedlifedata.com/resource/pubmed/chemical/Helminth Proteins, http://linkedlifedata.com/resource/pubmed/chemical/MCF2 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Nerve Tissue Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Phosphoproteins, http://linkedlifedata.com/resource/pubmed/chemical/Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Proto-Oncogene Proteins, http://linkedlifedata.com/resource/pubmed/chemical/UNC-73 protein, C elegans, http://linkedlifedata.com/resource/pubmed/chemical/cdc42 GTP-Binding Protein, http://linkedlifedata.com/resource/pubmed/chemical/platelet protein P47, http://linkedlifedata.com/resource/pubmed/chemical/rhoA GTP-Binding Protein
pubmed:status
MEDLINE
pubmed:month
Dec
pubmed:issn
1072-8368
pubmed:author
pubmed:issnType
Print
pubmed:volume
5
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1098-107
pubmed:dateRevised
2008-9-11
pubmed:meshHeading
pubmed-meshheading:9846881-Amino Acid Sequence, pubmed-meshheading:9846881-Blood Proteins, pubmed-meshheading:9846881-Caenorhabditis elegans Proteins, pubmed-meshheading:9846881-Catalytic Domain, pubmed-meshheading:9846881-Cell Cycle Proteins, pubmed-meshheading:9846881-Enzyme Activation, pubmed-meshheading:9846881-Escherichia coli, pubmed-meshheading:9846881-Frameshift Mutation, pubmed-meshheading:9846881-GTP Phosphohydrolases, pubmed-meshheading:9846881-GTP-Binding Proteins, pubmed-meshheading:9846881-Guanine Nucleotide Exchange Factors, pubmed-meshheading:9846881-Guanosine Diphosphate, pubmed-meshheading:9846881-Helminth Proteins, pubmed-meshheading:9846881-Humans, pubmed-meshheading:9846881-Magnetic Resonance Spectroscopy, pubmed-meshheading:9846881-Models, Molecular, pubmed-meshheading:9846881-Molecular Sequence Data, pubmed-meshheading:9846881-Mutagenesis, Site-Directed, pubmed-meshheading:9846881-Nerve Tissue Proteins, pubmed-meshheading:9846881-Phosphoproteins, pubmed-meshheading:9846881-Proteins, pubmed-meshheading:9846881-Proto-Oncogene Proteins, pubmed-meshheading:9846881-Sequence Alignment, pubmed-meshheading:9846881-Sequence Homology, Amino Acid, pubmed-meshheading:9846881-cdc42 GTP-Binding Protein, pubmed-meshheading:9846881-rhoA GTP-Binding Protein
pubmed:year
1998
pubmed:articleTitle
Structure and mutagenesis of the Dbl homology domain.
pubmed:affiliation
Cellular Biochemistry and Biophysics Program, Memorial Sloan-Kettering Cancer Center, New York, New York 10021, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S., Research Support, Non-U.S. Gov't