Switch to
Predicate | Object |
---|---|
rdf:type | |
lifeskim:mentions | |
pubmed:issue |
23
|
pubmed:dateCreated |
1999-2-3
|
pubmed:databankReference | |
pubmed:abstractText |
Bacterial DNA polymerase III (family C DNA polymerase), the principal chromosomal replicative enzyme, is known to occur in at least three distinct forms which have provisionally been classified as class I ( Escherichia coli DNA pol C-type), class II ( Bacillus subtilis DNA pol C-type) and class III (cyanobacteria DNA pol C-type). We have identified two family C DNA polymerase sequences in the hyperthermophilic bacterium Thermotoga maritima. One DNA polymerase consisting of 842 amino acid residues and having a molecular weight of 97 213 belongs to class I. The other one, consisting of 1367 amino acid residues and having a molecular weight of 155 361, is a member of class II. Comparative sequence analyses suggest that the class II DNA polymerase is the principal DNA replicative enzyme of the microbe and that the class I DNA polymerase may be functionally inactive. A phylogenetic analysis using the class II enzyme indicates that T.maritima is closely related to the low G+C Gram-positive bacteria, in particular to Clostridium acetobutylicum, and mycoplasmas. These results are in conflict with 16S rRNA-based phylogenies, which placed T.maritima as one of the deepest branches of the bacterial tree.
|
pubmed:grant | |
pubmed:language |
eng
|
pubmed:journal | |
pubmed:citationSubset |
IM
|
pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Bacterial Proteins,
http://linkedlifedata.com/resource/pubmed/chemical/Codon,
http://linkedlifedata.com/resource/pubmed/chemical/DNA Polymerase III,
http://linkedlifedata.com/resource/pubmed/chemical/DNA polymerase C,
http://linkedlifedata.com/resource/pubmed/chemical/DNA polymerase III, alpha subunit,
http://linkedlifedata.com/resource/pubmed/chemical/Nucleotidyltransferases
|
pubmed:status |
MEDLINE
|
pubmed:month |
Dec
|
pubmed:issn |
0305-1048
|
pubmed:author | |
pubmed:issnType |
Print
|
pubmed:day |
1
|
pubmed:volume |
26
|
pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
|
pubmed:pagination |
5300-9
|
pubmed:dateRevised |
2008-11-20
|
pubmed:meshHeading |
pubmed-meshheading:9826752-Amino Acid Sequence,
pubmed-meshheading:9826752-Bacterial Proteins,
pubmed-meshheading:9826752-Codon,
pubmed-meshheading:9826752-DNA Polymerase III,
pubmed-meshheading:9826752-Evolution, Molecular,
pubmed-meshheading:9826752-Molecular Sequence Data,
pubmed-meshheading:9826752-Nucleotidyltransferases,
pubmed-meshheading:9826752-Phylogeny,
pubmed-meshheading:9826752-Sequence Alignment,
pubmed-meshheading:9826752-Sequence Analysis, DNA,
pubmed-meshheading:9826752-Thermotoga maritima
|
pubmed:year |
1998
|
pubmed:articleTitle |
The hyperthermophilic bacterium Thermotoga maritima has two different classes of family C DNA polymerases: evolutionary implications.
|
pubmed:affiliation |
Department of Microbiology and Immunology, College of Medicine, The University of Arizona, Tucson, AZ 85724, USA.
|
pubmed:publicationType |
Journal Article,
Comparative Study,
Research Support, U.S. Gov't, P.H.S.
|