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pubmed-article:9783214 | lifeskim:mentions | umls-concept:C0678257 | lld:lifeskim |
pubmed-article:9783214 | lifeskim:mentions | umls-concept:C0009612 | lld:lifeskim |
pubmed-article:9783214 | lifeskim:mentions | umls-concept:C0220905 | lld:lifeskim |
pubmed-article:9783214 | lifeskim:mentions | umls-concept:C0936012 | lld:lifeskim |
pubmed-article:9783214 | pubmed:dateCreated | 1998-12-18 | lld:pubmed |
pubmed-article:9783214 | pubmed:abstractText | GeneExpress system has been designed to integrate description, analysis, and recognition of eukaryotic regulatory sequences. The system includes 5 basic units: (1) GeneNet contains an object-oriented database for accumulation of data on gene networks and signal transduction pathways and a Java-based viewer that allows an exploration and visualization of the GeneNet information; (2) Transcription Regulation combines the database on transcription regulatory regions of eukaryotic genes (TRRD) and TRRD Viewer; (3) Transcription Factor Binding Site Recognition contains a compilation of transcription factor binding sites (TFBSC) and programs for their analysis and recognition; (4) mRNA Translation is designed for analysis of structural and contextual features of mRNA 5'UTRs and prediction of their translation efficiency; and (5) ACTIVITY is the module for analysis and site activity prediction of a given nucleotide sequence. Integration of the databases in the GeneExpress is based on the Sequence Retrieval System (SRS) created in the European Bioinformatics Institute. | lld:pubmed |
pubmed-article:9783214 | pubmed:language | eng | lld:pubmed |
pubmed-article:9783214 | pubmed:journal | http://linkedlifedata.com/r... | lld:pubmed |
pubmed-article:9783214 | pubmed:citationSubset | IM | lld:pubmed |
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pubmed-article:9783214 | pubmed:status | MEDLINE | lld:pubmed |
pubmed-article:9783214 | pubmed:issn | 1553-0833 | lld:pubmed |
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pubmed-article:9783214 | pubmed:issnType | Print | lld:pubmed |
pubmed-article:9783214 | pubmed:volume | 6 | lld:pubmed |
pubmed-article:9783214 | pubmed:owner | NLM | lld:pubmed |
pubmed-article:9783214 | pubmed:authorsComplete | Y | lld:pubmed |
pubmed-article:9783214 | pubmed:pagination | 95-104 | lld:pubmed |
pubmed-article:9783214 | pubmed:dateRevised | 2006-11-15 | lld:pubmed |
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pubmed-article:9783214 | pubmed:year | 1998 | lld:pubmed |
pubmed-article:9783214 | pubmed:articleTitle | GeneExpress: a computer system for description, analysis, and recognition of regulatory sequences in eukaryotic genome. | lld:pubmed |
pubmed-article:9783214 | pubmed:affiliation | Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia. kol@bionet.nsc.ru | lld:pubmed |
pubmed-article:9783214 | pubmed:publicationType | Journal Article | lld:pubmed |
pubmed-article:9783214 | pubmed:publicationType | Research Support, Non-U.S. Gov't | lld:pubmed |