Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
6698
pubmed:dateCreated
1998-10-1
pubmed:databankReference
pubmed:abstractText
The peroxisome proliferator-activated receptor-gamma (PPAR-gamma) is a ligand-dependent transcription factor that is important in adipocyte differentiation and glucose homeostasis and which depends on interactions with co-activators, including steroid receptor co-activating factor-1 (SRC-1). Here we present the X-ray crystal structure of the human apo-PPAR-gamma ligand-binding domain (LBD), at 2.2 A resolution; this structure reveals a large binding pocket, which may explain the diversity of ligands for PPAR-gamma. We also describe the ternary complex containing the PPAR-gamma LBD, the antidiabetic ligand rosiglitazone (BRL49653), and 88 amino acids of human SRC-1 at 2.3 A resolution. Glutamate and lysine residues that are highly conserved in LBDs of nuclear receptors form a 'charge clamp' that contacts backbone atoms of the LXXLL helices of SRC-1. These results, together with the observation that two consecutive LXXLL motifs of SRC-1 make identical contacts with both subunits of a PPAR-gamma homodimer, suggest a general mechanism for the assembly of nuclear receptors with co-activators.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Histone Acetyltransferases, http://linkedlifedata.com/resource/pubmed/chemical/Hypoglycemic Agents, http://linkedlifedata.com/resource/pubmed/chemical/Ligands, http://linkedlifedata.com/resource/pubmed/chemical/Macromolecular Substances, http://linkedlifedata.com/resource/pubmed/chemical/NCOA1 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Nuclear Receptor Coactivator 1, http://linkedlifedata.com/resource/pubmed/chemical/Receptors, Cytoplasmic and Nuclear, http://linkedlifedata.com/resource/pubmed/chemical/Thiazoles, http://linkedlifedata.com/resource/pubmed/chemical/Thiazolidinediones, http://linkedlifedata.com/resource/pubmed/chemical/Transcription Factors, http://linkedlifedata.com/resource/pubmed/chemical/rosiglitazone
pubmed:status
MEDLINE
pubmed:month
Sep
pubmed:issn
0028-0836
pubmed:author
pubmed:issnType
Print
pubmed:day
10
pubmed:volume
395
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
137-43
pubmed:dateRevised
2009-11-19
pubmed:meshHeading
pubmed-meshheading:9744270-Amino Acid Sequence, pubmed-meshheading:9744270-Binding Sites, pubmed-meshheading:9744270-Cloning, Molecular, pubmed-meshheading:9744270-Conserved Sequence, pubmed-meshheading:9744270-Crystallography, X-Ray, pubmed-meshheading:9744270-Escherichia coli, pubmed-meshheading:9744270-Histone Acetyltransferases, pubmed-meshheading:9744270-Humans, pubmed-meshheading:9744270-Hypoglycemic Agents, pubmed-meshheading:9744270-Ligands, pubmed-meshheading:9744270-Macromolecular Substances, pubmed-meshheading:9744270-Molecular Sequence Data, pubmed-meshheading:9744270-Nuclear Receptor Coactivator 1, pubmed-meshheading:9744270-Protein Conformation, pubmed-meshheading:9744270-Protein Structure, Tertiary, pubmed-meshheading:9744270-Receptors, Cytoplasmic and Nuclear, pubmed-meshheading:9744270-Structure-Activity Relationship, pubmed-meshheading:9744270-Thiazoles, pubmed-meshheading:9744270-Thiazolidinediones, pubmed-meshheading:9744270-Transcription Factors, pubmed-meshheading:9744270-Transcriptional Activation
pubmed:year
1998
pubmed:articleTitle
Ligand binding and co-activator assembly of the peroxisome proliferator-activated receptor-gamma.
pubmed:affiliation
Department of Structural Chemistry, Glaxo Wellcome Research and Development, Research Triangle Park, North Carolina 27709, USA.
pubmed:publicationType
Journal Article