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PredicateObject
rdf:type
lifeskim:mentions
pubmed:dateCreated
1998-11-17
pubmed:abstractText
Interferon (IFN) regulatory factors (IRFs) are a family of transcription factors among which are IRF-1, IRF-2, and IFN consensus sequence binding protein (ICSBP). These factors share sequence homology in the N-terminal DNA-binding domain. IRF-1 and IRF-2 are further related and have additional homologous sequences within their C-termini. Whereas IRF-2 and ICSBP are identified as transcriptional repressors, IRF-1 is an activator. In the present work, the identification of functional domains in murine IRF-1 with regard to DNA-binding, nuclear translocation, heterodimerization with ICSBP and transcriptional activation are demonstrated. The minimal DNA-binding domain requires the N-terminal 124 amino acids plus an arbitrary C-terminal extension. By using mutants of IRF-1 fusion proteins with green fluorescent protein and monitoring their distribution in living cells, a nuclear location signal (NLS) was identified and found to be sufficient for nuclear translocation. Heterodimerization was confirmed by a two-hybrid system adapted to mammalian cells. The heterodimerization domain in IRF-1 was defined by studies in vitro and was shown to be homologous with a sequence in IRF-2, suggesting that IRF-2 also heterodimerizes with ICSBP through this sequence. An acidic domain in IRF-1 was found to be required and to be sufficient for transactivation. Epitope mapping of IRF-1 showed that regions within the NLS, the heterodimerization domain and the transcriptional activation domain are exposed for possible contacts with interacting proteins.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-1382447, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-1460054, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-2004116, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-2111015, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-2342456, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-2475256, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-2850164, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-2911367, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-3047590, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-3220255, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-3409321, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-3821727, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-3856251, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-4705382, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-5432063, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-6275366, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-7526889, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-7543195, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-7637809, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-7678054, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-7768900, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-7867795, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-7929448, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-7959027, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-7959028, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-8004672, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-8021262, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-8197182, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-8332497, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-8438157, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-8578587, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-8746784, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-8752276, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-8861914, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-8972225, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-9092512, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-9422515, http://linkedlifedata.com/resource/pubmed/commentcorrection/9742224-9463386
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/DNA, http://linkedlifedata.com/resource/pubmed/chemical/DNA-Binding Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Interferon Regulatory Factor-1, http://linkedlifedata.com/resource/pubmed/chemical/Interferon Regulatory Factors, http://linkedlifedata.com/resource/pubmed/chemical/Interferon-gamma, http://linkedlifedata.com/resource/pubmed/chemical/Irf1 protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/Nuclear Localization Signals, http://linkedlifedata.com/resource/pubmed/chemical/Phosphoproteins, http://linkedlifedata.com/resource/pubmed/chemical/Repressor Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Transcription Factors, http://linkedlifedata.com/resource/pubmed/chemical/interferon regulatory factor-8
pubmed:status
MEDLINE
pubmed:month
Oct
pubmed:issn
0264-6021
pubmed:author
pubmed:issnType
Print
pubmed:day
1
pubmed:volume
335 ( Pt 1)
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
147-57
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:9742224-Animals, pubmed-meshheading:9742224-Mice, pubmed-meshheading:9742224-DNA, pubmed-meshheading:9742224-Cell Nucleus, pubmed-meshheading:9742224-Protein Conformation, pubmed-meshheading:9742224-Cells, Cultured, pubmed-meshheading:9742224-Amino Acid Sequence, pubmed-meshheading:9742224-Binding Sites, pubmed-meshheading:9742224-Molecular Sequence Data, pubmed-meshheading:9742224-Dimerization, pubmed-meshheading:9742224-Structure-Activity Relationship, pubmed-meshheading:9742224-Phosphoproteins, pubmed-meshheading:9742224-Repressor Proteins, pubmed-meshheading:9742224-DNA-Binding Proteins, pubmed-meshheading:9742224-Transcriptional Activation, pubmed-meshheading:9742224-Gene Transfer Techniques, pubmed-meshheading:9742224-Transcription Factors, pubmed-meshheading:9742224-Interferon-gamma, pubmed-meshheading:9742224-Epitope Mapping
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