Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
11
pubmed:dateCreated
1998-6-25
pubmed:databankReference
pubmed:abstractText
We have identified, cloned, and sequenced the hca cluster encoding the dioxygenolytic pathway for initial catabolism of 3-phenylpropionic acid (PP) in Escherichia coli K-12. This cluster maps at min 57.5 of the chromosome and is composed of five catabolic genes arranged as a putative operon (hcaA1A2CBD) and two additional genes transcribed in the opposite direction that encode a potential permease (hcaT) and a regulator (hcaR). Sequence comparisons revealed that while hcaA1A2CD genes encode the four subunits of the 3-phenylpropionate dioxygenase, the hcaB gene codes for the corresponding cis-dihydrodiol dehydrogenase. This type of catabolic module is homologous to those encoding class IIB dioxygenases and becomes the first example of such a catabolic cluster in E. coli. The inducible expression of the hca genes requires the presence of the hcaR gene product, which acts as a transcriptional activator and shows significant sequence similarity to members of the LysR family of regulators. Interestingly, the HcaA1A2CD and HcaB enzymes are able to oxidize not only PP to 3-(2,3-dihydroxyphenyl)propionate (DHPP) but also cinnamic acid (CI) to its corresponding 2, 3-dihydroxy derivative. Further catabolism of DHPP requires the mhp-encoded meta fission pathway for the mineralization of 3-hydroxyphenylpropionate (3HPP) (A. Ferrández, J. L. García, and E. Díaz, J. Bacteriol. 179:2573-2581, 1997). Expression in Salmonella typhimurium of the mhp genes alone or in combination with the hca cluster allowed the growth of the recombinant bacteria in 3-hydroxycinnamic acid (3HCI) and CI, respectively. Thus, the convergent mhp- and hca-encoded pathways are also functional in S. typhimurium, and they are responsible for the catabolism of different phenylpropanoid compounds (3HPP, 3HCI, PP, and CI) widely available in nature.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-13844460, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-14171642, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-1537863, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-1569021, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-2025296, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-2231712, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-2548993, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-271968, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-3019995, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-3052271, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-3531186, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-3777934, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-4348920, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-5881653, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-6345502, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-6572363, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-7592340, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-7737502, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-7961399, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-7984417, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8048958, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8132464, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8257110, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8399388, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8438231, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8550403, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8550427, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8594594, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8626733, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8631713, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8654996, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8655491, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8702262, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8752345, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8759857, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8824602, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8890734, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8899984, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8922118, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-8955303, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9016546, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9073078, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9098055, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9143125, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9150211, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9190809, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9212411, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9244274, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9260946, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9278503, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9294455, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9315705, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9315862, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9322760, http://linkedlifedata.com/resource/pubmed/commentcorrection/9603882-9324265
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/3-phenylpropionic acid, http://linkedlifedata.com/resource/pubmed/chemical/Escherichia coli Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Membrane Transport Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Organic Anion Transporters, http://linkedlifedata.com/resource/pubmed/chemical/Oxidoreductases, http://linkedlifedata.com/resource/pubmed/chemical/Oxygenases, http://linkedlifedata.com/resource/pubmed/chemical/Phenylpropionates, http://linkedlifedata.com/resource/pubmed/chemical/Receptors, Cytoplasmic and Nuclear, http://linkedlifedata.com/resource/pubmed/chemical/Trans-Activators, http://linkedlifedata.com/resource/pubmed/chemical/Transcription Factors, http://linkedlifedata.com/resource/pubmed/chemical/constitutive androstane receptor
pubmed:status
MEDLINE
pubmed:month
Jun
pubmed:issn
0021-9193
pubmed:author
pubmed:issnType
Print
pubmed:volume
180
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2915-23
pubmed:dateRevised
2009-11-18
More...