rdf:type |
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lifeskim:mentions |
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pubmed:issue |
1
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pubmed:dateCreated |
1998-6-25
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pubmed:abstractText |
The binding site for the acceptor substrate poly(ADP-ribose) in the elongation reaction of the ADP-ribosyl transferase poly(ADP-ribose) polymerase (PARP) was detected by cocrystallizing the enzyme with an NAD+ analogue. The site was confirmed by mutagenesis studies. In conjunction with the binding site of the donor NAD+, the bound acceptor reveals the geometry of the elongation reaction. It shows in particular that the strictly conserved glutamate residue of all ADP-ribosylating enzymes (Glu988 of PARP) facilitates the reaction by polarizing both, donor and acceptor. Moreover, the binding properties of the acceptor site suggest a mechanism for the branching reaction, that also explains the dual specificity of this transferase for elongation and branching, which is unique among polymer-forming enzymes.
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pubmed:language |
eng
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pubmed:journal |
|
pubmed:citationSubset |
IM
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pubmed:chemical |
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pubmed:status |
MEDLINE
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pubmed:month |
Apr
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pubmed:issn |
0022-2836
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pubmed:author |
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pubmed:copyrightInfo |
Copyright 1998 Academic Press Limited.
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pubmed:issnType |
Print
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pubmed:day |
24
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pubmed:volume |
278
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
57-65
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:9571033-Adenosine Diphosphate Ribose,
pubmed-meshheading:9571033-Animals,
pubmed-meshheading:9571033-Binding Sites,
pubmed-meshheading:9571033-Chickens,
pubmed-meshheading:9571033-Crystallography, X-Ray,
pubmed-meshheading:9571033-Enzyme Inhibitors,
pubmed-meshheading:9571033-Humans,
pubmed-meshheading:9571033-Models, Molecular,
pubmed-meshheading:9571033-Mutagenesis,
pubmed-meshheading:9571033-NAD,
pubmed-meshheading:9571033-Niacinamide,
pubmed-meshheading:9571033-Peptide Fragments,
pubmed-meshheading:9571033-Poly(ADP-ribose) Polymerases,
pubmed-meshheading:9571033-Structure-Activity Relationship
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pubmed:year |
1998
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pubmed:articleTitle |
The mechanism of the elongation and branching reaction of poly(ADP-ribose) polymerase as derived from crystal structures and mutagenesis.
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pubmed:affiliation |
Institut für Organische Chemie und Biochemie, Albertstr. 21, Freiburg im Breisgau, D-79104, Germany.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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