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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
2
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pubmed:dateCreated |
1998-2-13
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pubmed:databankReference |
http://linkedlifedata.com/resource/pubmed/xref/PDB/1AV7,
http://linkedlifedata.com/resource/pubmed/xref/PDB/1AVT,
http://linkedlifedata.com/resource/pubmed/xref/PDB/1VGC,
http://linkedlifedata.com/resource/pubmed/xref/PDB/1VSB,
http://linkedlifedata.com/resource/pubmed/xref/PDB/2VGC,
http://linkedlifedata.com/resource/pubmed/xref/PDB/3VGC,
http://linkedlifedata.com/resource/pubmed/xref/PDB/3VSB,
http://linkedlifedata.com/resource/pubmed/xref/PDB/4VGC
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pubmed:abstractText |
In order to probe the structural basis of stereoselectivity in the serine protease family, a series of enantiomeric boronic acids RCH2CH(NHCOCH3)B(OH)2 has been synthesized and kinetically characterized as transition-state analog inhibitors using alpha-chymotrypsin and subtilisin Carlsberg as model systems. When the R-substituent in this series was changed from a p-chlorophenyl to a 1-naphthyl group, alpha-chymotrypsin, but not subtilisin, reversed its usual preference for l-enantiomers and bound more tightly to the D-enantiomer [Martichonok, V., & Jones, J. B. (1996) J. Am. Chem. Soc. 118, 950-958]. The structural factors responsible for the differences in stereoselectivity between the two enzymes have been explored by X-ray crystallographic examination of subtilisin Carlsberg and gamma-chymotrypsin complexes of the L- and D-enantiomers of p-chlorophenyl and 1-naphthyl boronic acid derivatives. In both enzymes, the L-isomers of the inhibitors, which are more closely related to the natural L-amino acid substrates, form tetrahedral adducts, covalently linking the central boron atom and Ogamma of the catalytic serine. The d-isomers, however, differ in the way they interact with subtilisin or gamma-chymotrypsin. With subtilisin, both the D-p-chlorophenyl and D-1-naphthyl inhibitor complexes form covalent Ser Ogamma-to-boron bonds, but with gamma-chymotrypsin, the same inhibitors lead to novel tetrahedral adducts covalently linking both Ser195 Ogamma and His57 Nepsilon2 covalently via the boron atom.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Boronic Acids,
http://linkedlifedata.com/resource/pubmed/chemical/Chymotrypsin,
http://linkedlifedata.com/resource/pubmed/chemical/Histidine,
http://linkedlifedata.com/resource/pubmed/chemical/Serine,
http://linkedlifedata.com/resource/pubmed/chemical/Serine Proteinase Inhibitors,
http://linkedlifedata.com/resource/pubmed/chemical/Subtilisins
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pubmed:status |
MEDLINE
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pubmed:month |
Jan
|
pubmed:issn |
0006-2960
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pubmed:author | |
pubmed:issnType |
Print
|
pubmed:day |
13
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pubmed:volume |
37
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
451-62
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:9425066-Binding Sites,
pubmed-meshheading:9425066-Boronic Acids,
pubmed-meshheading:9425066-Chymotrypsin,
pubmed-meshheading:9425066-Crystallography, X-Ray,
pubmed-meshheading:9425066-Histidine,
pubmed-meshheading:9425066-Models, Molecular,
pubmed-meshheading:9425066-Molecular Conformation,
pubmed-meshheading:9425066-Molecular Sequence Data,
pubmed-meshheading:9425066-Protein Conformation,
pubmed-meshheading:9425066-Serine,
pubmed-meshheading:9425066-Serine Proteinase Inhibitors,
pubmed-meshheading:9425066-Stereoisomerism,
pubmed-meshheading:9425066-Subtilisins
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pubmed:year |
1998
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pubmed:articleTitle |
Differences in binding modes of enantiomers of 1-acetamido boronic acid based protease inhibitors: crystal structures of gamma-chymotrypsin and subtilisin Carlsberg complexes.
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pubmed:affiliation |
Department of Biochemistry, University of Toronto, 1 King's College Circle, Toronto, Ontario M5S 1A8, Canada.
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pubmed:publicationType |
Journal Article,
Comparative Study,
Research Support, Non-U.S. Gov't
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