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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
8
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pubmed:dateCreated |
1998-2-11
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pubmed:abstractText |
We have mutated lysine 2 and arginine 7 in elongation factor Tu from Escherichia coli separately either to alanine or glutamic acid. The aim of the work was to reveal the possible interactions between the conserved N-terminal part of the molecule, which is rich in basic residues and aminoacyl-tRNA. The enzymatic characterization, comprising GDP and GTP temperature stability assays and measurement of nucleotide dissociation and association rate constants, GTPase activity and aminoacyl-tRNA binding, shows that position 2 is not involved in aminoacyl-tRNA binding, while position 7 is necessary to accomplish this activity. Furthermore, arginine 7 seems to play a role in regulating the binding of GTP. The three-dimensional structure of the ternary complex, EF-Tu:GTP:Phe-tRNAPhe, involving Thermus aquaticus EF-Tu and yeast Phe-tRNA(Phe), shows that Arg7 is in a position which permits salt bridge formation with Asp284, thus binding the N-terminus tightly to domain 2. We propose that this interaction is needed for aminoacyl-tRNA binding, and also for completing the structural rearrangement, which takes place when the factor switches from its GDP to its GTP form.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/GTP Phosphohydrolase-Linked...,
http://linkedlifedata.com/resource/pubmed/chemical/Guanosine Diphosphate,
http://linkedlifedata.com/resource/pubmed/chemical/Guanosine Triphosphate,
http://linkedlifedata.com/resource/pubmed/chemical/Peptide Elongation Factor Tu,
http://linkedlifedata.com/resource/pubmed/chemical/Pyridones,
http://linkedlifedata.com/resource/pubmed/chemical/RNA, Transfer, Phe,
http://linkedlifedata.com/resource/pubmed/chemical/mocimycin
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pubmed:status |
MEDLINE
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pubmed:month |
Aug
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pubmed:issn |
0269-2139
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
10
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
927-34
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:9415442-DNA Mutational Analysis,
pubmed-meshheading:9415442-Escherichia coli,
pubmed-meshheading:9415442-GTP Phosphohydrolase-Linked Elongation Factors,
pubmed-meshheading:9415442-Guanosine Diphosphate,
pubmed-meshheading:9415442-Guanosine Triphosphate,
pubmed-meshheading:9415442-Kinetics,
pubmed-meshheading:9415442-Models, Molecular,
pubmed-meshheading:9415442-Mutagenesis,
pubmed-meshheading:9415442-Nucleic Acid Conformation,
pubmed-meshheading:9415442-Peptide Elongation Factor Tu,
pubmed-meshheading:9415442-Protein Conformation,
pubmed-meshheading:9415442-Pyridones,
pubmed-meshheading:9415442-RNA, Transfer, Phe
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pubmed:year |
1997
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pubmed:articleTitle |
Mutational analysis of Escherichia coli elongation factor Tu in search of a role for the N-terminal region.
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pubmed:affiliation |
Institute of Molecular and Structural Biology, Aarhus University, Aarhus C, Denmark.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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