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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
3
pubmed:dateCreated
1997-4-7
pubmed:abstractText
The pathogenesis of myxoid chondrosarcoma (CS) is poorly understood. A recurrent translocation, t(9;22) (q22;q12), has been recognized in CS, specifically in extraskeletal myxoid CS. Recently, this translocation has been shown to represent a rearrangement of the EWS gene at 22q12 with a novel gene at 9q22 designated CHN (or TEC). Sequence analysis suggests that CHN encodes a novel orphan nuclear receptor with a zinc finger DNA-binding domain. The structure of this gene fusion has been characterized in only a limited number of extraskeletal myxoid CSs and its presence in other types of CS has not been extensively examined. We studied 46 cases of CS (8 extraskeletal myxoid, 4 skeletal myxoid, 4 mesenchymal, and 30 other) for the EWS/CHN gene fusion by reverse transcriptase polymerase chain reaction, Southern blotting, and long-range DNA polymerase chain reaction. The EWS/CHN gene fusion was present in 6 of 8 extraskeletal myxoid CSs and was not detected in any of the remaining cases, including the 4 skeletal myxoid CSs. The negative findings in the latter cases suggest that skeletal myxoid CS is pathogenetically distinct from its extraskeletal counterpart. Notably, 2 cases of extraskeletal myxoid CS showed neither an EWS/CHN fusion transcript nor EWS/CHN genomic fusion nor EWS or CHN genomic rearrangement, suggesting genetic heterogeneity within extraskeletal myxoid CS. Finally, we also provide evidence for alternative splicing of the 3' end of the fusion transcript. Extraskeletal myxoid CS thus represents yet another sarcoma type containing a gene fusion involving EWS.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-1283315, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-1451062, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-1782363, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-3194021, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-3422040, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-3488815, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-3967207, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-4043934, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7493135, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7503813, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7513544, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7539287, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7553599, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7556683, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7590695, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7635565, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7656206, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7700648, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7705655, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7706727, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7758108, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7773957, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7811288, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7862627, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-7877627, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8084618, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8162068, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8187063, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8223458, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8281518, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8287228, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8307570, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8401579, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8402563, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8521507, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8539235, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8570200, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8603349, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8614405, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8634690, http://linkedlifedata.com/resource/pubmed/commentcorrection/9060841-8637704
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
AIM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Mar
pubmed:issn
0002-9440
pubmed:author
pubmed:issnType
Print
pubmed:volume
150
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1049-58
pubmed:dateRevised
2011-11-17
pubmed:meshHeading
pubmed-meshheading:9060841-Adult, pubmed-meshheading:9060841-Aged, pubmed-meshheading:9060841-Aged, 80 and over, pubmed-meshheading:9060841-Alternative Splicing, pubmed-meshheading:9060841-Base Sequence, pubmed-meshheading:9060841-Blotting, Southern, pubmed-meshheading:9060841-Chimera, pubmed-meshheading:9060841-Chondrosarcoma, pubmed-meshheading:9060841-Cloning, Molecular, pubmed-meshheading:9060841-DNA, Complementary, pubmed-meshheading:9060841-DNA, Neoplasm, pubmed-meshheading:9060841-Female, pubmed-meshheading:9060841-Humans, pubmed-meshheading:9060841-Male, pubmed-meshheading:9060841-Middle Aged, pubmed-meshheading:9060841-Polymerase Chain Reaction, pubmed-meshheading:9060841-Prospective Studies, pubmed-meshheading:9060841-RNA, Neoplasm, pubmed-meshheading:9060841-Retrospective Studies, pubmed-meshheading:9060841-Sarcoma, Ewing, pubmed-meshheading:9060841-Soft Tissue Neoplasms
pubmed:year
1997
pubmed:articleTitle
Molecular analysis of the fusion of EWS to an orphan nuclear receptor gene in extraskeletal myxoid chondrosarcoma.
pubmed:affiliation
Department of Pathology, Memorial Sloan-Kettering Cancer Center, New York, New York 10021, USA.
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