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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
4
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pubmed:dateCreated |
1997-1-31
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pubmed:abstractText |
A detailed investigation of how nucleosomes are formed and arranged on the DNA sequence is a prerequisite to understanding the molecular mechanisms of DNA-dependent processes such as transcription, replication, DNA repair, and mutagenesis. In this report we analyzed the chromatin structure of exons 5-8 of the p53 gene in human fibroblasts. We mapped at the nucleotide level the positions of DNase I and micrococcal nuclease cleavage sites in permeabilized cells. Areas of clear DNase I protection, which would be indicative of the binding of sequence-specific proteins, were not detected. Instead, the micrococcal nuclease and DNase digestion patterns suggested that this region was covered by nucleosomes and that two areas spanning exons 5 and 6 are occupied preferentially. These nucleosomes could influence DNA damage distribution, repair of certain lesions, and other aspects of the mutagenesis process in p53 sequences.
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pubmed:grant | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Dec
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pubmed:issn |
0899-1987
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
17
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
192-201
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pubmed:dateRevised |
2007-11-14
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pubmed:meshHeading |
pubmed-meshheading:8989912-Base Sequence,
pubmed-meshheading:8989912-Chromatin,
pubmed-meshheading:8989912-DNA,
pubmed-meshheading:8989912-Deoxyribonuclease I,
pubmed-meshheading:8989912-Exons,
pubmed-meshheading:8989912-Fibroblasts,
pubmed-meshheading:8989912-Genes, p53,
pubmed-meshheading:8989912-Humans,
pubmed-meshheading:8989912-Micrococcal Nuclease,
pubmed-meshheading:8989912-Molecular Sequence Data,
pubmed-meshheading:8989912-Mutagenesis
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pubmed:year |
1996
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pubmed:articleTitle |
A high-resolution analysis of chromatin structure along p53 sequences.
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pubmed:affiliation |
Department of Biology, Beckman Research Institute, City of Hope National Medical Center, Duarte, California 91010, USA.
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, P.H.S.
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