Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
3
pubmed:dateCreated
1997-3-13
pubmed:databankReference
pubmed:abstractText
Pseudomonas aeruginosa co-expresses A-band lipopolysaccharide (LPS), a homopolymer of rhamnose, and B-band LPS, a heteropolymer with a repeating unit of 2-5 sugars which is the serotype-specific antigen. The gene clusters for A- and B-band biosynthesis in P. aeruginosa O5 (strain PAO1) have been cloned previously. Here we report the DNA sequence and molecular analysis of the B-band O-antigen biosynthetic cluster. Sixteen open reading frames (ORFs) thought to be involved in synthesis of the O5 O antigen were identified, including wzz (rol), wzy (rfc), and wbpA-wbpN. A further 3 ORFs not thought to be involved with LPS synthesis were identified (hisH, hisF, and uvrB). Most of the wbp genes are found only in serotypes O2, O5, O16, O18, and O20, which form a chemically and structurally related O-antigen serogroup. In contrast, wbpM and wbpN are common to all 20 serotypes of P. aeruginosa. Although wbpM is not serogroup-specific, knockout mutations confirmed it is necessary for O5 O-antigen biosynthesis. A novel insertion sequences, IS 1209, is present at the junction between the serogroup-specific and non-specific regions. We have predicted the functions of the proteins encoded in the wbp cluster based on their homologies to those in the databases, and provide a proposed pathway of P. aeruginosa O5 O-antigen biosynthesis.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Nov
pubmed:issn
0950-382X
pubmed:author
pubmed:issnType
Print
pubmed:volume
22
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
481-95
pubmed:dateRevised
2006-11-15
pubmed:meshHeading
pubmed-meshheading:8939432-Amino Acid Sequence, pubmed-meshheading:8939432-Aminohydrolases, pubmed-meshheading:8939432-Base Sequence, pubmed-meshheading:8939432-Binding Sites, pubmed-meshheading:8939432-Chromosome Mapping, pubmed-meshheading:8939432-DNA, Bacterial, pubmed-meshheading:8939432-Electrophoresis, Polyacrylamide Gel, pubmed-meshheading:8939432-Escherichia coli, pubmed-meshheading:8939432-Gene Expression Regulation, Bacterial, pubmed-meshheading:8939432-Genes, Bacterial, pubmed-meshheading:8939432-Lipopolysaccharides, pubmed-meshheading:8939432-Molecular Sequence Data, pubmed-meshheading:8939432-Molecular Structure, pubmed-meshheading:8939432-Multigene Family, pubmed-meshheading:8939432-Mutagenesis, Insertional, pubmed-meshheading:8939432-NAD, pubmed-meshheading:8939432-O Antigens, pubmed-meshheading:8939432-Open Reading Frames, pubmed-meshheading:8939432-Plasmids, pubmed-meshheading:8939432-Pseudomonas aeruginosa, pubmed-meshheading:8939432-Recombination, Genetic, pubmed-meshheading:8939432-Sequence Alignment, pubmed-meshheading:8939432-Sequence Analysis, DNA, pubmed-meshheading:8939432-Sequence Deletion, pubmed-meshheading:8939432-Sequence Homology, Amino Acid, pubmed-meshheading:8939432-Transaminases
pubmed:year
1996
pubmed:articleTitle
Molecular characterization of the Pseudomonas aeruginosa serotype O5 (PAO1) B-band lipopolysaccharide gene cluster.
pubmed:affiliation
Department of Microbiology, University of Guelph, Ontario, Canada.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't