Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
23
pubmed:dateCreated
1996-12-30
pubmed:abstractText
Recent studies have suggested that the retention of selectable marker cassettes (like PGK-Neo, in which a hybrid gene consisting of the phosphoglycerate kinase I promoter drives the neomycin phosphotransferase gene) in targeted loci can cause unexpected phenotypes in "knockout" mice due to disruption of expression of neighboring genes within a locus. We have studied targeted mutations in two multigene clusters, the granzyme B locus and the beta-like globin gene cluster. The insertion of PGK-Neo into the granzyme B gene, the most 5' gene in the granzyme B gene cluster, severely reduced the normal expression of multiple genes within the locus, even at distances greater than 100 kb from the mutation. Similarly, the insertion of a PGK-Neo cassette into the beta-globin locus control region (LCR) abrogates the expression of multiple globin genes downstream from the cassette. In contrast, a targeted mutation of the promyelocyte-specific cathepsin G gene (which lies just 3' to the granzyme genes in the same cluster) had minimal effects on upstream granzyme gene expression. Although the mechanism of these-long distance effects are unknown, the expression of PGK-Neo can be "captured" by the regulatory domain into which it is inserted. These results suggest that the PGK-Neo cassette can interact productively with locus control regions and thereby disrupt normal interactions between local and long-distance regulatory regions within a tissue-specific domain.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-1592262, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-2007574, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-2295643, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-2307468, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-2370867, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-2564317, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-2569462, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-2611223, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-2924354, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-3134294, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-3257230, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-3260382, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-3456593, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-3555842, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-3879975, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-7557375, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-7588068, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-7720554, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-7720708, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-7750651, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-7777569, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-7797078, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-7809093, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-7901120, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-7918106, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-8097432, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-8098710, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-8108408, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-8137431, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-8378321, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-8453108, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-8468056, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-8548813, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-8612132, http://linkedlifedata.com/resource/pubmed/commentcorrection/8917549-8649401
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Cathepsin G, http://linkedlifedata.com/resource/pubmed/chemical/Cathepsins, http://linkedlifedata.com/resource/pubmed/chemical/Ctsg protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/DNA Transposable Elements, http://linkedlifedata.com/resource/pubmed/chemical/Genetic Markers, http://linkedlifedata.com/resource/pubmed/chemical/Globins, http://linkedlifedata.com/resource/pubmed/chemical/Granzymes, http://linkedlifedata.com/resource/pubmed/chemical/Gzmb protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/Kanamycin Kinase, http://linkedlifedata.com/resource/pubmed/chemical/Phosphoglycerate Kinase, http://linkedlifedata.com/resource/pubmed/chemical/Phosphotransferases (Alcohol Group..., http://linkedlifedata.com/resource/pubmed/chemical/Serine Endopeptidases
pubmed:status
MEDLINE
pubmed:month
Nov
pubmed:issn
0027-8424
pubmed:author
pubmed:issnType
Print
pubmed:day
12
pubmed:volume
93
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
13090-5
pubmed:dateRevised
2009-11-19
pubmed:meshHeading
pubmed-meshheading:8917549-Animals, pubmed-meshheading:8917549-Cathepsin G, pubmed-meshheading:8917549-Cathepsins, pubmed-meshheading:8917549-DNA Transposable Elements, pubmed-meshheading:8917549-Gene Expression, pubmed-meshheading:8917549-Gene Library, pubmed-meshheading:8917549-Genetic Markers, pubmed-meshheading:8917549-Globins, pubmed-meshheading:8917549-Granzymes, pubmed-meshheading:8917549-Kanamycin Kinase, pubmed-meshheading:8917549-Mice, pubmed-meshheading:8917549-Mice, Knockout, pubmed-meshheading:8917549-Molecular Sequence Data, pubmed-meshheading:8917549-Multigene Family, pubmed-meshheading:8917549-Mutagenesis, Insertional, pubmed-meshheading:8917549-Phosphoglycerate Kinase, pubmed-meshheading:8917549-Phosphotransferases (Alcohol Group Acceptor), pubmed-meshheading:8917549-Polymerase Chain Reaction, pubmed-meshheading:8917549-Promoter Regions, Genetic, pubmed-meshheading:8917549-Regulatory Sequences, Nucleic Acid, pubmed-meshheading:8917549-Serine Endopeptidases
pubmed:year
1996
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